{"id":"W4409276851","doi":"10.33899/ijvs.2025.156053.4058","title":"Molecular recognition and phylogenetic tree analysis of Cystoisospora canis in stray dogs in Diwaniyah city, Iraq","year":2025,"lang":"en","type":"article","venue":"Al-mağallaẗ al-ʻirāqiyyaẗ li-l-ʻulūm al-bayṭariyyaẗ/Iraqi journal of veterinary sciences","topic":"Identification and Quantification in Food","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Phylogenetic tree; Tree (set theory); Biology; Evolutionary biology; Zoology; Veterinary medicine; Medicine; Mathematics; Genetics; Combinatorics; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00228965,0.0004221974,0.0008043819,0.002087464,0.0002075132,0.0001949653,0.0009469779,0.000235866,0.00007200566],"category_scores_gemma":[0.0002127339,0.0004162014,0.0003649322,0.002976869,0.0007748254,0.00008628874,0.0002460828,0.0003624034,0.000004313989],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009264366,"about_ca_system_score_gemma":0.000472117,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003978123,"about_ca_topic_score_gemma":0.001104994,"domain_scores_codex":[0.9956049,0.0004770182,0.001729349,0.0009203242,0.000725399,0.0005430619],"domain_scores_gemma":[0.9975916,0.0001005022,0.001030567,0.0006151189,0.0004675744,0.0001947118],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003562461,0.0005563857,0.04952106,0.00006712374,0.0004820084,0.0001158146,0.0003661005,0.001338446,0.9374154,0.0001719104,0.0009110902,0.008698443],"study_design_scores_gemma":[0.005598348,0.006731422,0.8199734,0.0008208533,0.001105857,0.0006889745,0.002854275,0.005377444,0.1299678,0.001581426,0.02333517,0.001964991],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9922963,0.00244013,0.001272213,0.002118567,0.0004581611,0.0003188016,0.00007452442,0.00001117766,0.001010132],"genre_scores_gemma":[0.9957323,0.00135376,0.001149793,0.001465529,0.00003114291,0.00001932229,0.00009296116,0.00002308802,0.0001320831],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8074476,"threshold_uncertainty_score":0.999829,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04794360113036299,"score_gpt":0.3276356644276786,"score_spread":0.2796920632973156,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}