{"id":"W4409324899","doi":"10.1063/4.0000472","title":"Structural Studies of an F-plasmid Protein TraW","year":2025,"lang":"en","type":"article","venue":"Structural Dynamics","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"York University","funders":"","keywords":"Plasmid; Computational biology; Computer science; Genetics; Biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009430115,0.0002161501,0.0001537259,0.000132171,0.0002494248,0.0001786513,0.000474824,0.0002374629,0.001136226],"category_scores_gemma":[0.0001964943,0.00009261522,0.0002048484,0.0002571282,0.0001457056,0.0002348858,0.0002021992,0.0006857315,0.0003678346],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004572791,"about_ca_system_score_gemma":0.0002923236,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002773311,"about_ca_topic_score_gemma":0.001712286,"domain_scores_codex":[0.9999564,0.000004232367,0.000001804537,0.000007371706,0.00001597085,0.00001426046],"domain_scores_gemma":[0.9999328,0.00001132214,0.00001395612,0.000003599409,0.00001641753,0.00002192479],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000356368,0.0001277524,0.001876016,0.0002225103,0.00002912585,0.0009214727,0.000205183,0.003430167,0.9799024,0.001170874,0.000913266,0.0108449],"study_design_scores_gemma":[0.00008658039,0.0008010918,0.02616477,0.00006459698,0.00007026314,0.002033596,0.0006690797,0.0348843,0.8931888,0.0008596214,0.0411016,0.00007570482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946592,0.001597811,0.001474037,0.0002442691,0.00003330172,0.00001445934,0.0003456763,0.00004018372,0.001590986],"genre_scores_gemma":[0.9900215,0.001343644,0.002535047,0.00009896267,0.000009947813,0.00001475732,0.002066164,0.00002006096,0.003889897],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002773311,"threshold_uncertainty_score":0.005514264,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008722216812380161,"score_gpt":0.2897582403479594,"score_spread":0.2810360235355793,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}