{"id":"W4409484551","doi":"10.1128/msystems.00062-25","title":"The case for microbiome stewardship: what it is and how to get there","year":2025,"lang":"en","type":"article","venue":"mSystems","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Dalhousie University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research; National Institutes of Health; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Microbiome; Stewardship (theology); Safeguarding; Ecosystem health; Environmental planning; Human health; Agriculture; Ecosystem; Environmental resource management; Business; Environmental stewardship; Ecosystem services; Political science; Ecology; Environmental health; Biology; Geography; Medicine; Environmental science; Bioinformatics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000266389,0.0001078319,0.0001171632,0.0000246626,0.000247935,0.0002283743,0.0001216785,0.0001112185,0.00000157535],"category_scores_gemma":[0.00002126606,0.0000759671,0.00005068978,0.00005988324,0.00003255307,0.000003057532,0.00008100845,0.00003887662,0.000004607873],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001536193,"about_ca_system_score_gemma":0.00005930003,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007178012,"about_ca_topic_score_gemma":0.0008553347,"domain_scores_codex":[0.9993308,0.00004532593,0.0001125258,0.0002572668,0.00002453606,0.0002295786],"domain_scores_gemma":[0.9995063,0.00002671374,0.00003825486,0.0003050666,0.00006291072,0.00006075306],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004965747,0.00001235172,0.0001867489,0.0002592208,0.00006276206,0.00001002258,0.000219117,4.243805e-7,0.6879141,0.000157378,0.3075121,0.003616116],"study_design_scores_gemma":[0.0003223979,0.0001207936,0.00006351454,0.00007669391,0.00001249707,0.000148782,0.001696904,0.000008460396,0.03927841,0.00001333547,0.9581606,0.00009758929],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9475947,0.01488345,0.0006895046,0.0344108,0.000846224,0.001096925,0.0001309829,0.00001128693,0.0003361021],"genre_scores_gemma":[0.9775279,0.0005878744,0.0001122586,0.003367048,0.000154334,0.00007323275,0.00002376182,0.00001378377,0.01813986],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6506485,"threshold_uncertainty_score":0.3097848,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01172687454618688,"score_gpt":0.278652640439876,"score_spread":0.2669257658936891,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}