{"id":"W4409527227","doi":"10.1128/mbio.03158-24","title":"<i>Aeromonas hydrophila</i> RTX adhesin has three ligand-binding domains that give the bacterium the potential to adhere to and aggregate a wide variety of cell types","year":2025,"lang":"en","type":"article","venue":"mBio","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Bacterial adhesin; Ligand (biochemistry); Fucose; Plasma protein binding; Chemistry; Biology; Biochemistry; Cell biology; Microbiology; Biophysics; Escherichia coli; Glycoprotein; Gene; Receptor","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001400604,0.000147502,0.0001487638,0.00002497524,0.0003711919,0.0001433306,0.0003188,0.00005744475,0.0002881469],"category_scores_gemma":[0.00001515047,0.00009216867,0.00007830276,0.0002267625,0.0001912047,0.0001153962,0.000459646,0.000149255,0.0002060402],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005919184,"about_ca_system_score_gemma":0.00001488704,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001279596,"about_ca_topic_score_gemma":0.001701756,"domain_scores_codex":[0.999181,0.00004028945,0.0001643402,0.0002697678,0.0001084853,0.0002361607],"domain_scores_gemma":[0.9994576,0.00007153102,0.00007329258,0.0003168272,0.000009554143,0.00007119383],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005730583,0.00004339502,0.0012545,0.000008148104,0.00002458198,0.000004743763,0.0009418125,0.00004898204,0.9910455,0.000018176,0.005465331,0.001087462],"study_design_scores_gemma":[0.0003833986,0.0001767394,0.1681851,0.0001149726,0.0001133875,0.0000209948,0.0004600626,0.00005404962,0.7464859,0.0002820157,0.08346999,0.0002533786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9887682,0.00005565638,0.0003970327,0.007284218,0.0003521743,0.0003806823,0.00004421424,0.00001688307,0.002700996],"genre_scores_gemma":[0.994956,0.00002812791,0.0003307486,0.001488717,0.00003260162,0.0000172071,0.000003724459,0.00001192355,0.003130933],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2445596,"threshold_uncertainty_score":0.3758529,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008455521862616104,"score_gpt":0.2081516064039139,"score_spread":0.1996960845412978,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}