{"id":"W4409561491","doi":"10.1371/journal.ppat.1013094","title":"HIV-associated penile anaerobes disrupt epithelial barrier integrity","year":2025,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Genital Health and Disease","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University Health Network; Western University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Fogarty International Center; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Foreskin; Biology; Prevotella; Keratinocyte; Epithelium; Microbiology; Cell biology; Immunology; In vitro; Bacteria; Cell culture","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001488804,0.0001752779,0.0003243056,0.0001246603,0.0001552521,0.00001732727,0.00009498039,0.000150896,0.0005270593],"category_scores_gemma":[0.001121066,0.0001494483,0.0001684211,0.0003130831,0.00006068773,0.0000479049,0.00005748471,0.0003205875,0.0003762529],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001289794,"about_ca_system_score_gemma":0.0005005539,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005075417,"about_ca_topic_score_gemma":0.00004435116,"domain_scores_codex":[0.99864,0.00007946702,0.0002934936,0.0003077339,0.0002502014,0.0004290876],"domain_scores_gemma":[0.9988524,0.00008209882,0.00005164185,0.0003379786,0.0001801584,0.0004957218],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0010865,0.00283113,0.9186812,0.001021061,0.0001469036,0.0005322906,0.0007793159,0.000002049731,0.05291988,0.000912554,0.01643723,0.004649862],"study_design_scores_gemma":[0.005252127,0.0005371544,0.9666943,0.0002626416,0.001149903,0.00001283315,0.0008268473,0.001285268,0.01495935,0.001765884,0.006757623,0.0004961057],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9829614,0.0005900423,0.00003596061,0.001346502,0.000245586,0.0004673877,0.000753046,0.0001616461,0.01343842],"genre_scores_gemma":[0.9906446,0.00001108635,0.0002621687,0.002146983,0.0001245219,0.00005046284,0.0002108183,0.00001860588,0.006530804],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04801304,"threshold_uncertainty_score":0.6094323,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0196301515655253,"score_gpt":0.2931200491102075,"score_spread":0.2734898975446822,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}