{"id":"W4409571955","doi":"10.1016/j.syapm.2025.126607","title":"Representatives of the Synergistaceae family, taxonomic description and genome sequence of Caenicola nitritireducens gen nov., sp. nov., a novel fermenting and amino-acid degrading bacterium isolated from a municipal anaerobic digester sludge","year":2025,"lang":"en","type":"article","venue":"Systematic and Applied Microbiology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Université de Pau et des Pays de l'Adour; Campus France; Centre National pour la Recherche Scientifique et Technique; Centre National de la Recherche Scientifique; European Commission; Institut National de la Santé et de la Recherche Médicale; Providence Health Care","keywords":"Biology; Fermentation; Bacteria; Whole genome sequencing; Microbiology; Anaerobic exercise; Genome; Gene; Genetics; Food science; Physiology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001334509,0.0004938942,0.000305888,0.001059791,0.0005317501,0.0004222488,0.0001456824,0.0002869408,0.0008196715],"category_scores_gemma":[0.0002877489,0.0001434056,0.0002916569,0.001138367,0.0001307445,0.0002473744,0.0002997401,0.0003726517,0.0004855755],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002234999,"about_ca_system_score_gemma":0.0008202169,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003540994,"about_ca_topic_score_gemma":0.004904619,"domain_scores_codex":[0.9998378,0.00001345977,0.00001837667,0.00004916295,0.00004908289,0.00003210041],"domain_scores_gemma":[0.9998043,0.00002881573,0.00004500509,0.00002079192,0.00005489342,0.00004615697],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006959672,0.0001225015,0.0188414,0.0004177558,0.00004650091,0.0002990359,0.0004742049,0.0003169996,0.9422281,0.0002283157,0.0009151022,0.03541407],"study_design_scores_gemma":[0.00009351844,0.0007729928,0.7622127,0.0002628413,0.0003534937,0.004641718,0.002074122,0.003347624,0.1308507,0.0005518312,0.09476616,0.00007234675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9589907,0.003589338,0.003371437,0.0002631721,0.00006644405,0.0001679443,0.02816335,0.0001798865,0.005207784],"genre_scores_gemma":[0.9185048,0.002834661,0.01428636,0.0001502591,0.00005122399,0.0002083102,0.05829063,0.00005983845,0.005613927],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003540994,"threshold_uncertainty_score":0.007040739,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02225054489562983,"score_gpt":0.2260959627837929,"score_spread":0.2038454178881631,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}