{"id":"W4409698076","doi":"10.1128/msphere.00020-25","title":"Virus species names have been standardized; virus names remain unchanged","year":2025,"lang":"en","type":"article","venue":"mSphere","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Biotechnology and Biological Sciences Research Council; National Institutes of Health; Medical Research Council Canada; Academy of Finland; Conselho Nacional de Desenvolvimento Científico e Tecnológico; National Institute of Allergy and Infectious Diseases; European Commission; Fundação de Amparo à Pesquisa do Estado de São Paulo; U.S. Department of Agriculture","keywords":"Nomenclature; Virus classification; Epithet; Biology; Virus; Taxonomy (biology); Taxon; Correct name; Virology; Linguistics; Zoology; Botany; Genetics; Genome; Philosophy","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01221191,0.001062212,0.001328881,0.007388508,0.002925521,0.006514381,0.002749084,0.002032124,0.03944509],"category_scores_gemma":[0.02793633,0.0007641012,0.001262813,0.0104583,0.00290088,0.00715349,0.002808542,0.007195484,0.05440529],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002913835,"about_ca_system_score_gemma":0.008471265,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004793117,"about_ca_topic_score_gemma":0.003056138,"domain_scores_codex":[0.9849391,0.003254346,0.002869216,0.00238748,0.005289522,0.001260347],"domain_scores_gemma":[0.9643383,0.003533437,0.004736272,0.009285035,0.01647994,0.001627037],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001223922,0.000239838,0.007720459,0.004320183,0.0001294411,0.0005324311,0.002862126,0.0005306193,0.04201518,0.07692312,0.5442351,0.3192676],"study_design_scores_gemma":[0.00001144618,0.00003726191,0.001815696,0.0002368942,0.00001909229,0.0001173816,0.0001483981,0.00004993685,0.002032166,0.001332009,0.9941754,0.00002443088],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"other","genre_gemma":"commentary","genre_scores_codex":[0.05343264,0.02389577,0.08783142,0.02438339,0.1469411,0.003572968,0.2348744,0.01381594,0.4112524],"genre_scores_gemma":[0.1037572,0.02412901,0.2286373,0.01119234,0.009162739,0.004414572,0.3350266,0.0110104,0.2726699],"genre_candidate":"commentary","genre_consensus":null,"teacher_disagreement_score":0.03944509,"threshold_uncertainty_score":0.1319569,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03215703410501682,"score_gpt":0.2709552047490068,"score_spread":0.23879817064399,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}