{"id":"W4409728031","doi":"10.1101/2025.04.16.649127","title":"Plant miRNAs and amino acids interact to shape soil bacterial communities","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"microRNA; Amino acid; Computational biology; Biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001997796,0.0002818615,0.0002803069,0.0001765506,0.0001690777,0.0004495159,0.0001395665,0.0003804468,0.0005820917],"category_scores_gemma":[0.0001544757,0.0002224386,0.0002172739,0.00009598042,0.0002323328,0.0002385879,0.0003315636,0.0003851887,0.0002474815],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003508364,"about_ca_system_score_gemma":0.0001377384,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005426298,"about_ca_topic_score_gemma":0.0005975802,"domain_scores_codex":[0.9997986,0.00003856129,0.00001139966,0.00007884204,0.00003549909,0.00003712026],"domain_scores_gemma":[0.9998522,0.00002648626,0.00004922033,0.00001491844,0.000021584,0.00003554273],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002338409,0.000003515629,0.0004369885,0.00001133997,0.000002736954,0.00001056886,0.000008475668,0.00003222597,0.9989803,0.0000348022,0.00001127363,0.0004443781],"study_design_scores_gemma":[0.00002198989,0.000249391,0.06505226,0.00001169033,0.00003018127,0.0001824333,0.0001143549,0.00577782,0.9244909,0.0003182655,0.003727304,0.00002340985],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9926732,0.0008500185,0.004878233,0.00008966573,0.00001795688,0.00001660132,0.0003511101,0.0001470113,0.0009761602],"genre_scores_gemma":[0.9952192,0.0001815806,0.003204067,0.00007321012,0.000005513632,0.00002050255,0.000214538,0.00003409587,0.001047333],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005820917,"threshold_uncertainty_score":0.002545476,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01777074799815405,"score_gpt":0.2090186197879632,"score_spread":0.1912478717898091,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}