{"id":"W4409781887","doi":"10.1093/jxb/eraf168","title":"Vacuolar phosphatases are essential for efficient nucleotide salvage in Arabidopsis","year":2025,"lang":"en","type":"article","venue":"Journal of Experimental Botany","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Queen's University; Iowa State University; National Science Foundation","keywords":"Arabidopsis; Vacuole; Exoribonuclease; Biochemistry; Cell biology; Biology; Nucleotide; RNA; Mutant; Arabidopsis thaliana; Autophagy; Chemistry; Cytoplasm; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001350988,0.00009212388,0.0001453525,0.00006215731,0.00005290445,0.00002516644,0.0002041456,0.00005398878,0.00002500409],"category_scores_gemma":[0.00005234266,0.00008381347,0.0001367023,0.00008567246,0.00003621446,0.000004932455,0.00005305728,0.00005758109,0.000001174626],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005997463,"about_ca_system_score_gemma":0.00007079506,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006143183,"about_ca_topic_score_gemma":0.000005299582,"domain_scores_codex":[0.9993137,0.00002175205,0.0002981306,0.0001415145,0.0000914706,0.0001334489],"domain_scores_gemma":[0.9995165,0.00001039419,0.0001672949,0.000195255,0.00006925721,0.00004127233],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002750817,0.0003135267,0.0008292126,0.000004838981,0.00004479265,0.000005757503,0.00003212229,0.0000978067,0.9908159,0.0001701971,0.00690717,0.0005035342],"study_design_scores_gemma":[0.001187348,0.0001610663,0.002897694,0.00005320717,0.00001653003,0.000007303335,0.0006863328,0.0001002992,0.976458,0.00002944366,0.01831418,0.00008862145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9742344,0.02349868,0.001294793,0.0002300455,0.0003482848,0.0001395667,0.00002682452,0.000001898482,0.0002254938],"genre_scores_gemma":[0.9983025,0.0001915584,0.0009381577,0.0002165592,0.0001347143,0.00001886063,0.000005666732,0.000009337446,0.0001826978],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02406803,"threshold_uncertainty_score":0.3417814,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00797095259124429,"score_gpt":0.2883301948155886,"score_spread":0.2803592422243443,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}