{"id":"W4409783483","doi":"10.1002/cpz1.70133","title":"<i>Cryptococcus neoformans</i> Biofilm Formation and Quantification","year":2025,"lang":"en","type":"article","venue":"Current Protocols","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biofilm; Cryptococcus neoformans; Microbiology; Candida albicans; Biology; Cryptococcosis; Corpus albicans; Cryptococcus; Pathogen; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001244095,0.00008341356,0.0001329646,0.00011108,0.0001588424,0.00003740944,0.00002684977,0.00003501652,0.0000156785],"category_scores_gemma":[0.00004477676,0.00006574752,0.00003548963,0.0002064774,0.00004357855,0.0001540698,0.00003087514,0.0001052939,0.00002914907],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003531852,"about_ca_system_score_gemma":0.0000338337,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002889381,"about_ca_topic_score_gemma":0.000001779943,"domain_scores_codex":[0.9994625,0.00001461291,0.0002050242,0.0001257944,0.00007450539,0.000117496],"domain_scores_gemma":[0.9996426,0.00001827058,0.00004980275,0.0001544698,0.0001006278,0.00003425892],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004043649,0.0009352647,0.09810942,0.005611742,0.00009811884,0.000001701937,0.0006383205,0.000004979674,0.03525061,0.05407112,0.0883388,0.7165356],"study_design_scores_gemma":[0.001489181,0.0002096455,0.05198522,0.0009094542,0.00004535117,0.000007852422,0.00007908209,0.0008873999,0.01805575,0.0007232755,0.9254918,0.0001160152],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"protocol","genre_gemma":"empirical","genre_scores_codex":[0.1459165,0.003620732,0.09130495,0.008491622,0.001957119,0.6627083,0.00006424126,0.001050542,0.08488593],"genre_scores_gemma":[0.5218572,0.0003494044,0.0009523372,0.0004572837,0.0002458236,0.4740388,0.0001037675,0.00002028491,0.001975078],"genre_candidate":"protocol","genre_consensus":null,"teacher_disagreement_score":0.837153,"threshold_uncertainty_score":0.2681106,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05677484017568814,"score_gpt":0.3957488797762189,"score_spread":0.3389740396005307,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}