{"id":"W4409838115","doi":"10.1038/s44298-025-00115-y","title":"High host specificity of alphacoronaviruses in Nearctic, insectivorous bats","year":2025,"lang":"en","type":"article","venue":"npj Viruses","topic":"Bat Biology and Ecology Studies","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; University of Toronto; Dalhousie University; University of Manitoba; Carleton University; Canadian Food Inspection Agency; Trent University; Ministry of Natural Resources and Forestry; University of Saskatchewan; Sunnybrook Hospital","funders":"Natural Sciences and Engineering Research Council of Canada; Institute of Infection and Immunity; Innovation Saskatchewan; Canadian Institutes of Health Research; Association of Medical Microbiology and Infectious Disease Canada; Government of Ontario","keywords":"Insectivore; Nearctic ecozone; Host (biology); Biology; Zoology; Ecology; Taxonomy (biology)","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001755615,0.0001245604,0.0002822007,0.00002669798,0.0001409879,0.000008838492,0.0002052023,0.0001625294,0.0003608465],"category_scores_gemma":[0.0001464156,0.00005159185,0.00005797554,0.0003660621,0.0002627373,0.00007327445,0.0001271405,0.0001489443,0.00003705656],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002835965,"about_ca_system_score_gemma":0.00001117217,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003754509,"about_ca_topic_score_gemma":0.02259947,"domain_scores_codex":[0.9990926,0.00009918213,0.000248882,0.0002541322,0.00006172812,0.0002434222],"domain_scores_gemma":[0.9992895,0.0005178037,0.00006713424,0.00005745608,0.00004553515,0.00002263202],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001480379,0.000248579,0.8677918,0.00001068657,0.00004278188,0.000005905095,0.00007185902,0.000002368072,0.1206069,0.002313275,0.001092381,0.007665413],"study_design_scores_gemma":[0.000164664,0.0001544602,0.959696,0.00001869714,0.000009291864,9.502824e-7,0.0002244417,8.876609e-7,0.03000561,0.001774359,0.00785662,0.00009403376],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995564,0.0007151745,6.520134e-7,0.0007981655,0.0003519789,0.0001301443,0.00003356374,0.0000387701,0.002367504],"genre_scores_gemma":[0.9983672,0.0002619946,0.00004000996,0.001069998,0.00006741375,0.00001827948,0.000004090785,5.101715e-7,0.0001704459],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09190413,"threshold_uncertainty_score":0.9952356,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03446736282565807,"score_gpt":0.2615692537358191,"score_spread":0.2271018909101611,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}