{"id":"W4409941021","doi":"10.3390/ani15091254","title":"Genome-Wide Association Study for Belly Traits in Canadian Commercial Crossbred Pigs","year":2025,"lang":"en","type":"article","venue":"Animals","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of Alberta","funders":"Agriculture and Agri-Food Canada; Genome Alberta","keywords":"Crossbreed; Biology; Genome-wide association study; Association (psychology); Genetics; Genotype; Gene; Single-nucleotide polymorphism; Psychology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002965827,0.0001094152,0.000143324,0.00006640836,0.000112174,0.00002724201,0.0001711593,0.0001458214,0.00001621319],"category_scores_gemma":[0.0002701526,0.0001222915,0.00005121691,0.0001022251,0.00001701394,0.000001739327,0.00003136256,0.00006233915,0.000004853678],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007960497,"about_ca_system_score_gemma":0.0004162229,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.008375631,"about_ca_topic_score_gemma":0.301966,"domain_scores_codex":[0.9990835,0.00005237636,0.0002053837,0.000254521,0.00006401492,0.0003402157],"domain_scores_gemma":[0.9996209,0.00005385498,0.00004825687,0.0001266563,0.00007338532,0.00007698077],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001189937,0.0001690518,0.9791705,0.00001584978,0.0001020767,6.435811e-7,0.000473773,0.00009984981,0.01223961,0.001095254,0.005194189,0.001320209],"study_design_scores_gemma":[0.0008781685,0.0003983039,0.9628505,0.000004405023,0.00002100141,1.108496e-7,0.0001364127,0.000001527895,0.0007779392,0.0009445073,0.03386955,0.0001175616],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944777,0.0002940659,0.0004070872,0.0006471641,0.0001268367,0.0006930022,0.0000794094,0.000005778534,0.003268983],"genre_scores_gemma":[0.9956091,0.000004644827,0.001143927,0.0009178212,0.0001097503,0.00008625544,0.00005411718,0.00001136188,0.00206301],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2935904,"threshold_uncertainty_score":0.9982277,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01142571774337783,"score_gpt":0.2713742562252195,"score_spread":0.2599485384818417,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}