{"id":"W4410023595","doi":"10.1139/cjm-2024-0168","title":"Food-borne microbes influence conjugative transfer of antimicrobial resistance plasmids in pre-disturbed gut microbiome","year":2025,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Canadian Food Inspection Agency","funders":"","keywords":"Microbiology; Biology; Citrobacter; Bacteria; Colonisation resistance; Microbiome; Population; Enterobacter; Salmonella; Enterobacteriaceae; Antimicrobial; Antibiotic resistance; Escherichia coli; Gut flora; Enterobacter cloacae; Streptomycin; Serratia; Food microbiology; Antibiotics; Genetics; Immunology; Pseudomonas","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001488818,0.0002972188,0.0002212722,0.0002551633,0.00009746452,0.0003779822,0.0001086966,0.0003155825,0.001029329],"category_scores_gemma":[0.000174321,0.0001319868,0.0001804709,0.00009890579,0.0002865239,0.0001747023,0.0002717403,0.0005327787,0.0001750412],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001524117,"about_ca_system_score_gemma":0.0002059939,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004101829,"about_ca_topic_score_gemma":0.000687028,"domain_scores_codex":[0.9997768,0.00004503416,0.00001288745,0.00004416725,0.00005345563,0.00006768143],"domain_scores_gemma":[0.9998102,0.00002266631,0.0000734708,0.00001297339,0.00001515936,0.00006562951],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002185201,0.00004310136,0.001023126,0.0000176811,0.000003062119,0.00005527246,0.00001778676,0.00001336041,0.9979177,0.00002436872,0.00001001339,0.0006559346],"study_design_scores_gemma":[0.00003340216,0.002757874,0.1098815,0.00001965133,0.00003783264,0.0005075008,0.000275223,0.0005284133,0.8848386,0.0001092123,0.0009957015,0.00001510982],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985741,0.0003300082,0.0005327416,0.00003892694,0.00001037587,0.00001457426,0.00008466595,0.0000144558,0.00040015],"genre_scores_gemma":[0.9976363,0.0002849722,0.0009424306,0.00004366637,0.000004880061,0.00001906817,0.0001297891,0.000006883833,0.0009318913],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001029329,"threshold_uncertainty_score":0.00344348,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004977758358256033,"score_gpt":0.2285613577133625,"score_spread":0.2235835993551065,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}