{"id":"W4410106857","doi":"10.1101/2025.05.02.25326864","title":"Genome wide association study of vaginal microbiota genetic diversity in French women","year":2025,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Nautical Research Society","funders":"European Commission","keywords":"Diversity (politics); Association (psychology); Genetic diversity; Biology; Evolutionary biology; Genetics; Genome; Genome-wide association study; Computational biology; Demography; Psychology; Genotype; Gene; Sociology; Anthropology; Single-nucleotide polymorphism; Population","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001113563,0.0003324375,0.0004717076,0.001058215,0.0007381415,0.0008675696,0.0002935989,0.0006317195,0.00392563],"category_scores_gemma":[0.002234841,0.0001946434,0.0007211671,0.001457815,0.0002866091,0.0001762188,0.0003897989,0.0004200141,0.0002686106],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006465378,"about_ca_system_score_gemma":0.0005064845,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.05019392,"about_ca_topic_score_gemma":0.03125475,"domain_scores_codex":[0.9992641,0.0002795927,0.00003385387,0.0002164474,0.00008112731,0.0001249408],"domain_scores_gemma":[0.9990504,0.0003638412,0.0002355349,0.00009892451,0.0001281405,0.0001231126],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004320209,0.0000304812,0.9920382,0.00003128769,0.0004722316,0.0003142284,0.0002478765,0.00009101057,0.001428254,0.0001547802,0.0006055477,0.004154006],"study_design_scores_gemma":[0.00002189641,0.00008092517,0.9978671,0.00001864701,0.0001161632,0.0003259643,0.000193316,0.0002044076,0.00008736106,0.0000686883,0.001009182,0.000006340998],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956294,0.001695555,0.0002888365,0.0003854838,0.00002467506,0.000007656388,0.00111862,0.00001631097,0.0008334668],"genre_scores_gemma":[0.9985667,0.0003311498,0.0002206062,0.00008216648,0.00002002885,0.000007590186,0.0003825758,0.000005434657,0.0003838124],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05019392,"threshold_uncertainty_score":0.09980351,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02264049834460518,"score_gpt":0.2817376395948347,"score_spread":0.2590971412502295,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}