{"id":"W4410115380","doi":"10.1093/molbev/msaf102","title":"Where Did the Y Chromosome in the Spiny Rat Go, and How Did It Get There?","year":2025,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science","keywords":"Biology; Genetics; Y chromosome; Chromosomal translocation; Autosome; Chromosome; Chromosome 17 (human); Chromosome 19; Chromosome 22; Chromosome 21; Most recent common ancestor; Gene; Genome; Evolutionary biology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005305454,0.0002773979,0.0005629318,0.0006375821,0.001048753,0.001283135,0.0004376725,0.0007975594,0.001338055],"category_scores_gemma":[0.0007680905,0.0002550971,0.0004633335,0.0007131069,0.00135013,0.002346593,0.0006659686,0.001530051,0.000668646],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006084421,"about_ca_system_score_gemma":0.000828181,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007779193,"about_ca_topic_score_gemma":0.01563947,"domain_scores_codex":[0.9997919,0.00002747516,0.000007739282,0.00008850014,0.00003461286,0.00004982431],"domain_scores_gemma":[0.9997919,0.00001981987,0.00005567354,0.00002592054,0.00006397861,0.00004274554],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0009682974,0.00008914863,0.2773378,0.001256116,0.0005918911,0.004960217,0.008448617,0.001346439,0.3011482,0.04469264,0.004328941,0.3548317],"study_design_scores_gemma":[0.00005545087,0.0006976648,0.7171047,0.001044684,0.0007155774,0.005464908,0.01432603,0.001397753,0.02969441,0.03289508,0.1962688,0.0003349021],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9363893,0.03110295,0.0136488,0.005653532,0.0005980176,0.0000323755,0.0007995414,0.0002020108,0.01157348],"genre_scores_gemma":[0.9610495,0.01291993,0.01208172,0.002232585,0.0001713587,0.0000313466,0.0008654213,0.0001472373,0.01050089],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007779193,"threshold_uncertainty_score":0.01546782,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006022179038853033,"score_gpt":0.2607169223380966,"score_spread":0.2546947432992435,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}