{"id":"W4410166159","doi":"10.21203/rs.3.rs-6206868/v1","title":"Comparative Analysis of Butternut (Juglans cinerea) and Japanese Walnut (Juglans ailantifolia) Chloroplast Genomes","year":2025,"lang":"en","type":"preprint","venue":"Research Square","topic":"Nuts composition and effects","field":"Nursing","cited_by":1,"is_retracted":false,"has_abstract":false,"ca_institutions":"Natural Resources Canada","funders":"National Institute of Food and Agriculture; Purdue University; U.S. Department of Agriculture","keywords":"Juglans; Botany; Biology; Chloroplast; Juglandaceae; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001038597,0.0004772025,0.001592106,0.002894271,0.0003125525,0.0002272697,0.0006219094,0.000417362,0.0002504587],"category_scores_gemma":[0.0001206041,0.0004460584,0.0004597154,0.001904452,0.0004147457,0.00009144394,0.001089741,0.001528244,0.0000432494],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003114124,"about_ca_system_score_gemma":0.0001359679,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00255846,"about_ca_topic_score_gemma":0.00125883,"domain_scores_codex":[0.9952056,0.001143385,0.0006019644,0.001038407,0.001218723,0.000791901],"domain_scores_gemma":[0.9961663,0.001392029,0.0002218522,0.001090285,0.000826053,0.0003034807],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01414669,0.005480933,0.5171992,0.05076186,0.03863676,0.0008109078,0.1513404,0.03392869,0.06958466,0.003233978,0.09734373,0.01753221],"study_design_scores_gemma":[0.006030371,0.002602499,0.7465967,0.01055522,0.007048076,0.0000406007,0.013826,0.1484932,0.03507883,0.001489256,0.02499558,0.003243722],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9783605,0.002638607,0.00007522823,0.001565826,0.0006422353,0.001415072,0.002067496,0.0001364636,0.0130986],"genre_scores_gemma":[0.9959177,0.0003556007,0.000143762,0.00007516859,0.0002209741,0.0001255911,0.00139404,0.00002634467,0.001740822],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2293975,"threshold_uncertainty_score":0.9997991,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06191468091473964,"score_gpt":0.4099412182374675,"score_spread":0.3480265373227279,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}