{"id":"W4410232257","doi":"10.1099/mgen.0.001386","title":"Detection of novel Plasmodium falciparum haplotypes under treatment pressure in paediatric severe malaria","year":2025,"lang":"en","type":"article","venue":"Microbial Genomics","topic":"Malaria Research and Control","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Institut Mérieux; Université de Montpellier; Fondation pour la Recherche Médicale; Agence Nationale de la Recherche; Centre National de la Recherche Scientifique; Alliance Française contre les Maladies Parasitaires","keywords":"Plasmodium falciparum; Malaria; Artesunate; Quinine; Parasite hosting; Virology; Biology; Multiplicity of infection; Immunology; Virus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004871234,0.0001761974,0.0002275073,0.0003731934,0.0002077291,0.0002783832,0.0001751656,0.0002754298,0.001151662],"category_scores_gemma":[0.001584935,0.0001585547,0.0001462463,0.0005285597,0.0002998447,0.0001850725,0.0002601428,0.0002865381,0.0001530405],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001720429,"about_ca_system_score_gemma":0.0001394284,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007656257,"about_ca_topic_score_gemma":0.001245986,"domain_scores_codex":[0.999574,0.0001347663,0.00002800829,0.0001217893,0.00008543857,0.00005598808],"domain_scores_gemma":[0.9990231,0.0002478992,0.0005002051,0.00005765338,0.00008977629,0.0000814252],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000328592,0.00002503535,0.9564105,0.0000781444,0.00002803399,0.0004858378,0.0006248581,0.0002936683,0.02830287,0.00007306944,0.0002270012,0.01312234],"study_design_scores_gemma":[0.000006563352,0.0001828122,0.9933622,0.0000126232,0.00001868812,0.001803373,0.000260483,0.0005001394,0.003025738,0.00005894473,0.0007631665,0.000005096279],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986727,0.0002357816,0.0006028196,0.00002541938,0.000002596812,0.00001040561,0.000206087,0.000007951303,0.000236145],"genre_scores_gemma":[0.9985129,0.0001238442,0.001015239,0.00002080048,0.000005031601,0.0000118255,0.0002117814,0.00000533949,0.00009337006],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001151662,"threshold_uncertainty_score":0.003852665,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01397981852236865,"score_gpt":0.2503412133200925,"score_spread":0.2363613947977238,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}