{"id":"W4410400129","doi":"10.7554/elife.94502.2","title":"Post-fertilization transcription initiation in an ancestral LTR retrotransposon drives lineage-specific genomic imprinting of ZDBF2","year":2025,"lang":"en","type":"preprint","venue":"eLife","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Retrotransposon; Genomic imprinting; Imprinting (psychology); Biology; Lineage (genetic); Genetics; Evolutionary biology; Genome; Gene; Transposable element; DNA methylation; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001059142,0.000196091,0.0001082423,0.0001895697,0.0001287144,0.0002027958,0.0001700299,0.0002035063,0.001886286],"category_scores_gemma":[0.0001052535,0.0001453207,0.0001906453,0.00008886788,0.0001568214,0.0001008186,0.0002310689,0.0003741817,0.0007437191],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002654451,"about_ca_system_score_gemma":0.00009153964,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005319204,"about_ca_topic_score_gemma":0.001427008,"domain_scores_codex":[0.999881,0.00001455561,0.000006972957,0.00004470942,0.00002461657,0.00002800791],"domain_scores_gemma":[0.9999177,0.00002015651,0.0000237545,0.00001088152,0.000007112443,0.00002035649],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002642609,0.000003641258,0.0002526118,0.000008512602,7.801265e-7,0.00002490236,0.00001275977,0.00001130849,0.9990132,0.00006995491,0.00001575449,0.0005599759],"study_design_scores_gemma":[0.00002058697,0.0001627456,0.02301962,0.00001448596,0.00001218603,0.0004923643,0.00008763546,0.001465203,0.9683108,0.00008211129,0.006324782,0.000007502842],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931131,0.0006594258,0.004089539,0.00005108739,0.00002090734,0.0000148415,0.0004326904,0.0001091513,0.001509159],"genre_scores_gemma":[0.9939162,0.0001718644,0.001856401,0.00003668613,0.000006144049,0.000009363599,0.0007660298,0.00003469523,0.003202664],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001886286,"threshold_uncertainty_score":0.006310225,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02373800015006255,"score_gpt":0.27654331456725,"score_spread":0.2528053144171874,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}