{"id":"W4410508050","doi":"10.1111/jeu.70012","title":"Complete Mitochondrial Genomes of Ancyromonads Provide Clues for the Gene Content and Genome Structures of Ancestral Mitochondria","year":2025,"lang":"en","type":"article","venue":"Journal of Eukaryotic Microbiology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Japan Society for the Promotion of Science; Kyungpook National University; Ministry of Education, Culture, Sports, Science and Technology; Institute for Fermentation, Osaka","keywords":"Biology; Genome; Mitochondrial DNA; Genetics; Gene; Evolutionary biology; Lineage (genetic); Eukaryote","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001254917,0.0003206102,0.0002700568,0.0008040924,0.0003812225,0.0003599885,0.0002016534,0.0003803011,0.001242368],"category_scores_gemma":[0.0005938162,0.0001730776,0.0002896929,0.0007974249,0.0001860091,0.0006437436,0.0005042662,0.0005599263,0.0005236606],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002530555,"about_ca_system_score_gemma":0.0002921272,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001019496,"about_ca_topic_score_gemma":0.002454056,"domain_scores_codex":[0.9998964,0.00001097995,0.000008434022,0.0000362137,0.00002599698,0.00002188869],"domain_scores_gemma":[0.9995894,0.00009382125,0.0001179326,0.00005740968,0.00006836958,0.00007304132],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000400061,0.00002358421,0.0119961,0.0002920548,0.00003556993,0.0002454798,0.000250991,0.000319605,0.971823,0.0005334713,0.0001346897,0.01394549],"study_design_scores_gemma":[0.00005658654,0.0005815917,0.7081938,0.0001659019,0.0002987285,0.004579093,0.0011303,0.003377716,0.2274302,0.002928666,0.05116503,0.00009231664],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9773053,0.005491452,0.007770814,0.0001213813,0.00002221667,0.00002137029,0.007938462,0.000082479,0.001246476],"genre_scores_gemma":[0.9564143,0.003239107,0.01644656,0.00008744801,0.00002741354,0.00003052534,0.02249813,0.00004858844,0.001207809],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001242368,"threshold_uncertainty_score":0.004156113,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02327928114939729,"score_gpt":0.2527145630388377,"score_spread":0.2294352818894404,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}