{"id":"W4410520471","doi":"10.3390/pathogens14050499","title":"High Prevalence and Genetic Heterogeneity of Anaplasma marginale in Smallholder Bovine Populations of Pakistan, and Its Implications","year":2025,"lang":"en","type":"article","venue":"Pathogens","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Veterinary medicine; Anaplasmosis; Herd; Population; Phylogenetic tree; Animal science; Virology; Gene; Genetics; Tick; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003293125,0.0001899466,0.0001956072,0.0007747522,0.0005794949,0.0004130105,0.0002067179,0.0002219215,0.0005810377],"category_scores_gemma":[0.000663409,0.000160623,0.00009589388,0.0004984991,0.000622998,0.0002828462,0.0002115904,0.0001775072,0.0000731996],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002940558,"about_ca_system_score_gemma":0.0002680639,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009620486,"about_ca_topic_score_gemma":0.01178138,"domain_scores_codex":[0.9996984,0.00006851927,0.00002196833,0.0001051731,0.0000523226,0.00005373848],"domain_scores_gemma":[0.9994736,0.0001461005,0.0002255783,0.00002123975,0.00006948099,0.00006406593],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007769322,0.00003581061,0.9848405,0.00002633206,0.0000187118,0.0002664371,0.0008481288,0.00003219534,0.01008593,0.00002832609,0.00002971526,0.003710304],"study_design_scores_gemma":[0.000002542296,0.0001160535,0.9978753,0.000008220098,0.000006699349,0.0006071433,0.0009625215,0.00005894121,0.0002025781,0.00002763304,0.0001297749,0.000002602545],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996779,0.00007767432,0.00008286773,0.000008772419,9.527271e-7,0.000003885357,0.00004102301,7.582399e-7,0.0001062402],"genre_scores_gemma":[0.9997413,0.00007017132,0.000102334,0.000007756631,0.00000190192,0.000002667738,0.0000447942,2.535131e-7,0.00002878719],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009620486,"threshold_uncertainty_score":0.01912898,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01800894420897573,"score_gpt":0.2776111195495256,"score_spread":0.2596021753405498,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}