{"id":"W4410598659","doi":"10.3390/pathogens14060514","title":"Discovery and Genomic Characterisation of Novel Papillomaviruses in Australian Wild Birds","year":2025,"lang":"en","type":"article","venue":"Pathogens","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of the Sunshine Coast; Australian Government","keywords":"Biology; Computational biology; Evolutionary biology; Geography; Virology; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001627895,0.0002239679,0.0002927395,0.001366656,0.0005497589,0.0005354313,0.0002120958,0.0005040382,0.000554851],"category_scores_gemma":[0.0005235613,0.0002285694,0.0004620879,0.001081128,0.0003817378,0.0002332539,0.0003361963,0.0003428773,0.000252972],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003693434,"about_ca_system_score_gemma":0.0002866458,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01148489,"about_ca_topic_score_gemma":0.02043612,"domain_scores_codex":[0.9997715,0.00001631752,0.00001945386,0.00008430777,0.00006342315,0.00004497916],"domain_scores_gemma":[0.999481,0.00009008381,0.0001536063,0.00004104256,0.0001439722,0.00009034105],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002181947,0.00008333686,0.3190835,0.0002719178,0.00006448267,0.00115014,0.003514226,0.0002212749,0.6603564,0.0001275838,0.0001261308,0.01478271],"study_design_scores_gemma":[0.000003564712,0.0001820299,0.9911936,0.00002052307,0.00003173705,0.0008271505,0.0008093311,0.0002682442,0.00447739,0.00001967027,0.002159749,0.00000709408],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981809,0.0002636832,0.0003545375,0.00001490672,0.000004042663,0.00002808134,0.0005961856,0.000006208584,0.0005515078],"genre_scores_gemma":[0.9956,0.0003307585,0.001636573,0.0000608548,0.000007148609,0.00002083184,0.001508929,0.000006286105,0.0008286618],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01148489,"threshold_uncertainty_score":0.02283609,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0124241207445933,"score_gpt":0.2764292261229076,"score_spread":0.2640051053783143,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}