{"id":"W4410642509","doi":"10.1007/s00122-025-04917-9","title":"Genome-wide association analyses for revealing QTN, QTN-by-environment and QTN-by-QTN interactions in soybean phenology","year":2025,"lang":"en","type":"article","venue":"Theoretical and Applied Genetics","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université Laval","funders":"","keywords":"Biology; Quantitative trait locus; Phenology; Genome-wide association study; Genetics; Agronomy; Genotype; Single-nucleotide polymorphism; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003873976,0.0007952463,0.0006627527,0.001963016,0.001014764,0.0008037733,0.0008167715,0.0007239494,0.002927014],"category_scores_gemma":[0.003610182,0.0003912143,0.002727201,0.002567013,0.0005662628,0.0004938502,0.001019764,0.001348485,0.0002342158],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004356158,"about_ca_system_score_gemma":0.0008896658,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006918585,"about_ca_topic_score_gemma":0.01508764,"domain_scores_codex":[0.9966199,0.001710244,0.0002363855,0.0009207904,0.0002479526,0.0002646135],"domain_scores_gemma":[0.9952389,0.003140453,0.000609392,0.0003889333,0.0001903616,0.0004319744],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.005790818,0.0003965761,0.80785,0.0001924187,0.007627001,0.001403115,0.0005456147,0.001929464,0.1504146,0.00144671,0.0005359522,0.02186767],"study_design_scores_gemma":[0.0001199705,0.0003139118,0.9878486,0.00001229664,0.001734643,0.0004470793,0.0001742146,0.005425724,0.002513239,0.0005551158,0.000819554,0.00003569758],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9909325,0.0005079331,0.007025717,0.00009734243,0.00003407152,0.00001435344,0.0009058213,0.00006078362,0.0004216013],"genre_scores_gemma":[0.9930537,0.0001284969,0.005603774,0.00004975262,0.00001667408,0.00003351417,0.000579056,0.00004874413,0.0004862289],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006918585,"threshold_uncertainty_score":0.02048779,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01567759932645516,"score_gpt":0.2543421351577877,"score_spread":0.2386645358313325,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}