{"id":"W4410817719","doi":"10.1016/j.fsi.2025.110453","title":"Transcriptome analysis of medaka spermatogonial stem cell line (SG3) infected with ranaviruses in vitro","year":2025,"lang":"en","type":"article","venue":"Fish & Shellfish Immunology","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China","keywords":"Biology; Transcriptome; In vitro; Line (geometry); Cell culture; Stem cell; Cell biology; Zoology; Genetics; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001516442,0.0002332539,0.0007235767,0.0002382546,0.0001495439,0.00002355205,0.0003161237,0.0001908798,0.0002869835],"category_scores_gemma":[0.00002406569,0.0001061277,0.0002051379,0.002794187,0.000288999,0.0001094145,0.0000991951,0.0002638041,0.00001209596],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006344,"about_ca_system_score_gemma":0.00002456628,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001616708,"about_ca_topic_score_gemma":0.01187778,"domain_scores_codex":[0.9984085,0.0001827968,0.0005105644,0.0003802567,0.0001345886,0.0003833235],"domain_scores_gemma":[0.9992434,0.0003095793,0.0001477716,0.0001243611,0.0001442486,0.00003064642],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008459087,0.0004965987,0.1563884,0.00001849368,0.001190596,0.00001263515,0.0003730817,0.00006557951,0.8332637,0.0001274792,0.0002250499,0.006992429],"study_design_scores_gemma":[0.0008826961,0.0005274122,0.8307658,0.00003213277,0.0006373024,0.000003708859,0.0007699975,0.00007634109,0.1542871,0.00004156247,0.01168616,0.0002897744],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945741,0.0005259336,0.00001910351,0.0007699582,0.0001342897,0.0002352337,0.0001733971,0.00008860268,0.003479336],"genre_scores_gemma":[0.9987509,0.0003597761,0.00002839758,0.0003743355,0.00002455311,0.0000368946,0.00008145167,0.000001800023,0.0003418625],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6789767,"threshold_uncertainty_score":0.6628079,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01266594482161558,"score_gpt":0.222119320731248,"score_spread":0.2094533759096324,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}