{"id":"W4410851718","doi":"10.1126/science.adu7144","title":"Pre-European contact leprosy in the Americas and its current persistence","year":2025,"lang":"en","type":"article","venue":"Science","topic":"Leprosy Research and Treatment","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Assembly of First Nations","funders":"Agence Nationale de la Recherche; Infrastructures en Biologie Santé et Agronomie","keywords":"Leprosy; Clade; Mycobacterium leprae; Colonization; Phylogenetic tree; Geography; Ethnology; Persistence (discontinuity); Old World; Colonialism; Biology; Genealogy; Zoology; Archaeology; History; Immunology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006268686,0.00005012231,0.00006885754,0.00008209097,0.000125023,0.00005006044,0.000177128,0.000004780206,0.000006170738],"category_scores_gemma":[0.0002455588,0.00002731884,0.00001624355,0.0005877023,0.0002324322,0.00008406679,0.00007956139,0.0001143587,0.0000221032],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000546045,"about_ca_system_score_gemma":0.000197288,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001496237,"about_ca_topic_score_gemma":0.000005817921,"domain_scores_codex":[0.9991678,0.00004479063,0.0000675952,0.0002327874,0.0002782529,0.0002087461],"domain_scores_gemma":[0.9996418,0.00004141607,0.00001289121,0.0001892034,0.00004549602,0.00006921952],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002032184,0.0008124892,0.655296,0.0002102666,0.00002047958,0.0002987355,0.007496601,0.0000020942,0.03874138,0.004829507,0.0003907162,0.2916985],"study_design_scores_gemma":[0.0005460061,0.0002515037,0.9929863,0.0001069016,0.000008817336,0.00001914301,0.000368705,0.0003219224,0.00189912,0.00005596603,0.00339972,0.00003588417],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9789448,0.002720365,0.00001319459,0.00222636,0.00005332814,0.0003649599,0.000001278593,0.000009838292,0.01566582],"genre_scores_gemma":[0.9991425,0.0001691225,0.00002810168,0.0002343727,0.0000110077,0.00001324808,4.824694e-7,0.000001404459,0.0003997892],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3376903,"threshold_uncertainty_score":0.111403,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05501343880820203,"score_gpt":0.3868698975650786,"score_spread":0.3318564587568766,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}