{"id":"W4410942579","doi":"10.1093/jambio/lxaf135","title":"The outer membrane transporter FadL was involved in the uptake of C18  <i>n</i>-alkane for enhancement of biodegradation in <i>Pseudomonas aeruginosa</i> TJM4","year":2025,"lang":"en","type":"article","venue":"Journal of Applied Microbiology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Science North","funders":"Shaanxi Provincial Science and Technology Department; National Natural Science Foundation of China","keywords":"Alkane; Pseudomonas aeruginosa; Mutant; Biofilm; Bacteria; Pseudomonadaceae; Efflux; Bacterial outer membrane; Microbiology; Pseudomonadales; Chemistry; Biodegradation; Biology; Gene; Biochemistry; Bioremediation; Escherichia coli; Genetics; Organic chemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007565059,0.0001430461,0.0003486985,0.0001182262,0.000029738,0.000006478564,0.0004483731,0.0003045848,0.000002997499],"category_scores_gemma":[0.00001736901,0.00008664076,0.0001309036,0.0001595256,0.0002137824,0.000002248185,0.00004366614,0.0001682946,2.294091e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001437434,"about_ca_system_score_gemma":0.000112657,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008172126,"about_ca_topic_score_gemma":0.0002893556,"domain_scores_codex":[0.9986097,0.00004063487,0.000906783,0.000177537,0.00004544096,0.0002199423],"domain_scores_gemma":[0.9991375,0.00005149652,0.0004394263,0.0002518707,0.0001066282,0.00001311476],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001032881,0.0001469496,0.0001110455,0.00004079296,0.00007581712,0.000001032272,0.00009128678,0.00001066464,0.9894769,0.0005831808,0.0004359342,0.007993542],"study_design_scores_gemma":[0.001636041,0.0004157121,0.0005599433,0.00002869487,0.0000340994,0.00000987278,0.0002322338,0.000001539544,0.9322241,0.0003479853,0.06443629,0.00007352123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962301,0.0008618305,0.0007161084,0.001313347,0.0002657009,0.0004245562,0.0000331931,0.00000100458,0.0001541048],"genre_scores_gemma":[0.9968411,0.001292378,0.001283527,0.0004082273,0.00005561022,0.00002248317,0.00005985218,0.000007099632,0.00002971755],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06400035,"threshold_uncertainty_score":0.3533108,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006798308160928614,"score_gpt":0.2220482276516571,"score_spread":0.2152499194907285,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}