{"id":"W4411012216","doi":"10.1111/1462-2920.70112","title":"A Biosynthetic and Taxonomic Atlas of the Global Lichen Holobiont","year":2025,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"National Cancer Institute; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Biology; Lichen; Microbacterium; Holobiont; Metagenomics; Anthozoa; Ecology; Bacteria; 16S ribosomal RNA; Symbiosis; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003683704,0.0007334355,0.0003599814,0.0120572,0.0006236489,0.0008867828,0.0002533544,0.0002386727,0.006790881],"category_scores_gemma":[0.000595053,0.0001428882,0.000392281,0.01127637,0.0003173012,0.0007920722,0.001093116,0.0004618632,0.002048085],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004341299,"about_ca_system_score_gemma":0.0007765679,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003608422,"about_ca_topic_score_gemma":0.008476426,"domain_scores_codex":[0.9996445,0.00005917378,0.00004220136,0.00009877908,0.00007479169,0.00008048931],"domain_scores_gemma":[0.9991614,0.00008665742,0.0003289673,0.00009753159,0.000159636,0.0001658938],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0007679039,0.00009572175,0.2543445,0.003861057,0.0003438444,0.0006873286,0.003757777,0.00140939,0.3490942,0.002690896,0.009442369,0.3735051],"study_design_scores_gemma":[0.000008246845,0.0001946565,0.8135148,0.0002583335,0.0001279025,0.001686843,0.001440093,0.0005544184,0.008836967,0.0007741441,0.172564,0.00003948619],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.774498,0.02130284,0.01135433,0.0003647236,0.0000814212,0.0001396104,0.154767,0.001320972,0.03617099],"genre_scores_gemma":[0.7427921,0.01491764,0.06244722,0.0002025121,0.0001084355,0.0002834346,0.1682032,0.0003479171,0.01069748],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0120572,"threshold_uncertainty_score":0.02271777,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.002550917252397605,"score_gpt":0.1529138422819048,"score_spread":0.1503629250295072,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}