{"id":"W4411016802","doi":"10.1016/j.xpro.2025.103873","title":"How has structuring your ideas into protocols contributed to your research progress and facilitated collaboration with others in the field?","year":2025,"lang":"en","type":"article","venue":"STAR Protocols","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Structuring; Troubleshooting; Protocol (science); Field (mathematics); Computer science; Publication; Process (computing); Data science; Political science; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.1730737,0.001835169,0.001374203,0.004665202,0.01059805,0.02876732,0.004542307,0.006958383,0.02938761],"category_scores_gemma":[0.385591,0.002221713,0.002623203,0.003998846,0.0183187,0.04041355,0.01763248,0.02301913,0.02860839],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.007893657,"about_ca_system_score_gemma":0.02703214,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002198778,"about_ca_topic_score_gemma":0.002065963,"domain_scores_codex":[0.868504,0.09093411,0.007093817,0.004879273,0.0247039,0.003884975],"domain_scores_gemma":[0.6289175,0.1702359,0.01844794,0.08418218,0.07166921,0.02654728],"domain_codex":null,"domain_gemma":"methods","domain_candidate":"methods","domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"qualitative","study_design_scores_codex":[0.0003331167,0.0002643901,0.002228443,0.002170385,0.0001862993,0.0008114404,0.04603937,0.0005552454,0.005363224,0.1969545,0.508374,0.2367196],"study_design_scores_gemma":[0.00006805091,0.0001229945,0.0003068113,0.001502221,0.0000627461,0.0006155437,0.00962838,0.0005808119,0.00397181,0.06021214,0.9227525,0.0001760937],"study_design_candidate":"qualitative","study_design_consensus":null,"genre_codex":"commentary","genre_gemma":"empirical","genre_scores_codex":[0.007781228,0.00858944,0.2550801,0.6154464,0.05536741,0.001387664,0.0008694515,0.00616395,0.04931435],"genre_scores_gemma":[0.1325142,0.02861255,0.5051339,0.1768541,0.02241944,0.00676894,0.002569996,0.02031933,0.1048074],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.8269264,"threshold_uncertainty_score":0.9153121,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03314849776212087,"score_gpt":0.3761143882624982,"score_spread":0.3429658905003773,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}