{"id":"W4411336365","doi":"10.1080/22221751.2025.2521850","title":"Genetic characterization of influenza A viruses circulating in Hong Kong, China, 2023: the first influenza epidemic after the lifting of 2.5 years of COVID-19 non-pharmaceutical interventions","year":2025,"lang":"en","type":"article","venue":"Emerging Microbes & Infections","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Princess Margaret Cancer Centre","funders":"Health and Health Services Research Fund","keywords":"Subclade; Phylogenetic tree; Neuraminidase; Pandemic; Virology; Hemagglutinin (influenza); Biology; Clade; Coronavirus disease 2019 (COVID-19); Medicine; Genetics; Virus; Gene; Internal medicine; Disease","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009850318,0.0001959269,0.0004738637,0.0006531181,0.0002729679,0.00001898184,0.0002217836,0.00009654796,0.0001302758],"category_scores_gemma":[0.003019664,0.0001545177,0.0003458645,0.001577896,0.0005118505,0.000124331,0.0003473147,0.0005309831,0.000007204981],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001745517,"about_ca_system_score_gemma":0.0002622716,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001830496,"about_ca_topic_score_gemma":0.00061911,"domain_scores_codex":[0.9977087,0.0002083224,0.001230935,0.0002626887,0.000240988,0.0003483621],"domain_scores_gemma":[0.9981361,0.000707519,0.0004096177,0.0004509637,0.0002328192,0.00006295667],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001228401,0.0002648637,0.8428667,0.001536185,0.0003885858,0.000004505897,0.00425229,0.003396678,0.1457998,0.00007508034,0.0001113987,0.001180997],"study_design_scores_gemma":[0.001128735,0.00007498477,0.9807675,0.001911258,0.0002728879,0.00001340888,0.0003910051,0.001041782,0.006292349,0.00006215333,0.007921537,0.0001223277],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939007,0.00203314,0.001995126,0.0007712714,0.0001665195,0.0008925301,0.00004996288,0.00002947574,0.0001612916],"genre_scores_gemma":[0.9978859,0.0002673639,0.0001391724,0.001451123,0.00005640616,0.0001425111,0.000004600063,0.00002262609,0.00003029791],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1395075,"threshold_uncertainty_score":0.6301048,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06951170962304773,"score_gpt":0.4271243853585894,"score_spread":0.3576126757355417,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}