{"id":"W4411450143","doi":"10.1099/ijsem.0.006807","title":"Bradyrhizobium tunisiense sp. nov., a novel rhizobial species isolated from Acacia saligna nodules","year":2025,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Biology; Bradyrhizobium; Phylogenetic tree; 16S ribosomal RNA; Phylogenetics; Lineage (genetic); Bradyrhizobium japonicum; Genetics; Genome; Botany; Gene; Rhizobiaceae; Bacteria; Symbiosis; Rhizobium","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003372343,0.0001945299,0.0005107982,0.0001019436,0.0001230856,0.00007176157,0.0005945565,0.0001891715,0.0002395473],"category_scores_gemma":[0.000217118,0.00008802984,0.0001982964,0.0001793104,0.0001544447,0.0001796277,0.0001605033,0.0001807507,0.00002540347],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001369784,"about_ca_system_score_gemma":0.00004855847,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001113392,"about_ca_topic_score_gemma":0.00005029433,"domain_scores_codex":[0.9983435,0.0001545823,0.0009067967,0.0002335218,0.000153252,0.0002083834],"domain_scores_gemma":[0.9981542,0.0005873619,0.0005600846,0.0000645423,0.0005668807,0.00006690873],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001765062,0.0001321065,0.006823999,0.0001121988,0.0004855411,0.00001764198,0.00009035821,7.329801e-7,0.9877713,0.0008763126,0.003431487,0.000081807],"study_design_scores_gemma":[0.009896811,0.002146645,0.8283741,0.03351139,0.001756282,0.01568172,0.006760641,0.0007066753,0.06465526,0.01883573,0.01484577,0.00282893],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9911892,0.001879891,0.000211997,0.004203527,0.00164814,0.0002008738,0.0004364765,0.00002499245,0.000204833],"genre_scores_gemma":[0.997714,0.00004453622,0.0007159499,0.0005312911,0.000483575,0.000004656108,0.0001070467,0.000001681192,0.0003972417],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.923116,"threshold_uncertainty_score":0.3589753,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01324989196059756,"score_gpt":0.2159148495997772,"score_spread":0.2026649576391796,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}