{"id":"W4411523420","doi":"10.1094/phytofr-02-25-0014-a","title":"A Draft Genome Assembly for <i>Diaporthe humulicola</i> , the Causal Agent of Halo Blight of Hop","year":2025,"lang":"en","type":"article","venue":"PhytoFrontiers™","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"College of Engineering, Michigan State University; Michigan State University","keywords":"Genome; Biology; Contig; GenBank; Hop (telecommunications); Genetics; Blight; Gene; Botany","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000138801,0.0001305039,0.0002114575,0.0000420191,0.00006750021,0.000009756752,0.0002496934,0.0000797096,0.000004841227],"category_scores_gemma":[0.00006355612,0.00009688787,0.0002142658,0.0001043941,0.00008550244,0.000003028677,0.00008034263,0.00004002238,8.838101e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007658077,"about_ca_system_score_gemma":0.0001197622,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001021591,"about_ca_topic_score_gemma":0.00002226548,"domain_scores_codex":[0.9991941,0.00003530957,0.0002469923,0.0002266163,0.00009978071,0.0001972383],"domain_scores_gemma":[0.9993323,0.00002212645,0.0001321465,0.0003540957,0.0001145266,0.00004480553],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000181297,0.0001225025,0.003687566,0.000104261,0.0001901791,0.000001309263,0.00004063767,0.00003234387,0.9771287,0.000238688,0.01769222,0.0005802468],"study_design_scores_gemma":[0.0009621,0.0003394009,0.02505344,0.00004570327,0.000269166,0.000003126784,0.0001997749,0.0001532753,0.6520126,0.0001615877,0.3205538,0.0002459325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9617402,0.01294711,0.01596249,0.0003698075,0.000529283,0.0008963014,0.00304237,0.00001314311,0.004499295],"genre_scores_gemma":[0.9972304,0.0003048095,0.0004422323,0.0002926586,0.0001040603,0.0000667571,0.0002325195,0.00001256479,0.001314038],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3251161,"threshold_uncertainty_score":0.3950972,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008944963007760404,"score_gpt":0.2433666702079463,"score_spread":0.2344217072001859,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}