{"id":"W4411613511","doi":"10.1111/mec.70006","title":"Evolution and Organisation of <scp>MHC II</scp> Genes in Harbour Porpoises: Insights From Long‐Read Cetacean Genome Assemblies, Whole Genome Re‐Sequencing and Locus‐Specific Genotyping","year":2025,"lang":"en","type":"article","venue":"Molecular Ecology","topic":"Marine animal studies overview","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Fisheries and Oceans Canada","funders":"Bundesamt für Naturschutz; Universität Potsdam","keywords":"Porpoise; Phocoena; Biology; Subspecies; Genome; Genetics; Evolutionary biology; Major histocompatibility complex; Population; Locus (genetics); Gene; Zoology; Harbour","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002693982,0.000209769,0.0002036979,0.000706546,0.0003163808,0.0005318568,0.0001587476,0.0003381074,0.0006028834],"category_scores_gemma":[0.0005397559,0.0001758656,0.0003398397,0.0007522904,0.0003254275,0.0003004794,0.0004356219,0.000402257,0.0002230103],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001867573,"about_ca_system_score_gemma":0.0001622652,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001470318,"about_ca_topic_score_gemma":0.002728718,"domain_scores_codex":[0.9998001,0.00001973803,0.00001086858,0.0001122463,0.00003190747,0.00002508108],"domain_scores_gemma":[0.9995934,0.0001001127,0.0001714816,0.00003044183,0.00005023682,0.00005431834],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004065321,0.00005158396,0.3259596,0.0003242297,0.0002509779,0.0008082528,0.002229426,0.00194811,0.6383209,0.0002855982,0.0004084912,0.02900625],"study_design_scores_gemma":[0.000006348888,0.00007161754,0.9877692,0.0000335307,0.00008248216,0.0004675862,0.0003748283,0.002027593,0.005687933,0.0001570172,0.003306866,0.00001507597],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977478,0.0002529602,0.0009243714,0.00002982307,0.000003347339,0.00000396526,0.000728539,0.00002126766,0.0002878655],"genre_scores_gemma":[0.9910519,0.0003000865,0.003935689,0.00008542526,0.00001047236,0.00001734033,0.003903225,0.00004959548,0.0006462416],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001470318,"threshold_uncertainty_score":0.002923548,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01088583384984339,"score_gpt":0.2085869104522051,"score_spread":0.1977010766023617,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}