{"id":"W4411743989","doi":"10.1111/jfd.70004","title":"Metabarcoding Reveals a Potentially Undescribed Columnaris‐Causing Bacterium in Peracute Skin Disease of Rainbow Trout ( <scp> <i>Oncorhynchus mykiss</i> </scp> , Walbaum)","year":2025,"lang":"en","type":"article","venue":"Journal of Fish Diseases","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Prince Edward Island","funders":"","keywords":"Flavobacterium; Biology; Rainbow trout; Aquaculture; Outbreak; Microbiology; Zoology; Bacteria; Fishery; Pseudomonas; Virology; Fish <Actinopterygii>","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004287413,0.0003824441,0.0009411441,0.0006522019,0.0001828029,0.0001044839,0.00049293,0.0001771864,0.00017305],"category_scores_gemma":[0.0007669844,0.0003455928,0.0007227072,0.0005759457,0.0002462985,0.0004709842,0.0002348346,0.0004185199,0.00001228767],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001406616,"about_ca_system_score_gemma":0.0004193319,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003569464,"about_ca_topic_score_gemma":0.00002876414,"domain_scores_codex":[0.9972214,0.0004523827,0.001230432,0.000380981,0.0001426428,0.0005721361],"domain_scores_gemma":[0.9979554,0.0002926413,0.0008729116,0.0003629685,0.0003525855,0.0001634306],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001245195,0.001774795,0.03782166,0.0006876574,0.002039556,0.0006181829,0.000689825,0.00007738922,0.7543226,0.0003591237,0.1974129,0.002951005],"study_design_scores_gemma":[0.01639771,0.0004431459,0.7632989,0.003661656,0.007377931,0.0001272307,0.004635648,0.00001723225,0.05577773,0.001354497,0.1462269,0.0006814091],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.985345,0.01008081,0.0004035384,0.001334503,0.0008571168,0.0005395241,0.000551388,0.00003839832,0.0008496938],"genre_scores_gemma":[0.9922047,0.0005206339,0.0001329553,0.001452239,0.0001060378,0.00001141396,0.0002054463,0.00002930944,0.005337249],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7254773,"threshold_uncertainty_score":0.9998996,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008822381033999445,"score_gpt":0.2382239278797421,"score_spread":0.2294015468457427,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}