{"id":"W4411759179","doi":"10.1093/icb/icaf116","title":"Urbanization and the Gut Microbiome: Insights From the Anna’s Hummingbird (<i>Calypte anna</i>) in California","year":2025,"lang":"en","type":"article","venue":"Integrative and Comparative Biology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of General Medical Sciences; California State University, East Bay; Canadian Society for Clinical Investigation","keywords":"Microbiome; Hummingbird; Biology; Ecology; Urbanization; Habitat; Wildlife; Geography","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001257087,0.0001822797,0.0001817412,0.0004070691,0.0009536744,0.0005179198,0.000138322,0.0001898586,0.0007822858],"category_scores_gemma":[0.0001497454,0.0001361204,0.0001498483,0.0003528868,0.0004639631,0.000151061,0.0003900258,0.0002971984,0.0001179285],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006116008,"about_ca_system_score_gemma":0.0004493512,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.1065371,"about_ca_topic_score_gemma":0.367061,"domain_scores_codex":[0.9999083,0.00001076698,0.000002040569,0.00004342523,0.00001440088,0.00002101056],"domain_scores_gemma":[0.9998842,0.00001288439,0.00003080687,0.000005431526,0.00002238144,0.00004421853],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002305113,0.0001066626,0.9552101,0.0000716127,0.0000920601,0.0004284891,0.004777054,0.0001640312,0.02504268,0.00008190924,0.0008214016,0.0129735],"study_design_scores_gemma":[0.000001689996,0.00003964425,0.9971281,0.00001173378,0.00001455393,0.00008963856,0.001672643,0.00004918196,0.000151478,0.00001144817,0.0008266201,0.00000329117],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990293,0.0002348096,0.00005139854,0.00003314592,0.000002373512,0.000003294597,0.00017301,0.000001966607,0.0004707878],"genre_scores_gemma":[0.9980046,0.0004379589,0.0004653586,0.00009950621,0.000005772468,0.000006933479,0.0003651687,0.000004161629,0.0006104616],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1065371,"threshold_uncertainty_score":0.2118338,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01358736168039338,"score_gpt":0.2854576722286635,"score_spread":0.2718703105482702,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}