{"id":"W4411782464","doi":"10.3390/microorganisms13071528","title":"Meta-Transcriptomic Response to Copper Corrosion in Drinking Water Biofilms","year":2025,"lang":"en","type":"article","venue":"Microorganisms","topic":"Water Treatment and Disinfection","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of Alberta; Office of Research and Development; U.S. Environmental Protection Agency","keywords":"Biofilm; Microbiology; Biology; Transcriptome; Bacteria; Gene; Virulence; Microbial population biology; Chemistry; Biochemistry; Gene expression; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002710925,0.0001489161,0.0001680339,0.0001149176,0.0001017223,0.0000487403,0.0001288432,0.00006669325,0.00216575],"category_scores_gemma":[0.000005011999,0.000101555,0.00007139414,0.0002576989,0.00003717124,0.0001229637,0.0001165964,0.00006776481,0.002352625],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002548738,"about_ca_system_score_gemma":0.000005845161,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004202925,"about_ca_topic_score_gemma":0.0004544195,"domain_scores_codex":[0.9990527,0.00008414752,0.0001714964,0.0003130166,0.0000996365,0.0002789827],"domain_scores_gemma":[0.9997243,0.00001782477,0.00001173135,0.0001939355,0.000003323213,0.00004890254],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001685331,0.00007300379,0.04014238,0.000001735132,0.00001866838,0.000007532436,0.000850839,0.00009180872,0.9571536,0.000006067856,0.001322503,0.0001633394],"study_design_scores_gemma":[0.0004597299,0.00005376918,0.04975291,0.00000826369,0.0001051024,0.00000270079,0.00003851935,0.000004752265,0.9404624,0.0001908844,0.008798426,0.0001225729],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961761,0.00002697264,0.0004123369,0.001285607,0.000223392,0.0002567913,0.000002136765,0.00005567276,0.001560984],"genre_scores_gemma":[0.9919459,0.000002356412,0.0005363501,0.000887964,0.000005731158,0.00002487823,0.000009335647,0.0000124532,0.006575077],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01669121,"threshold_uncertainty_score":0.9987464,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01258493514139771,"score_gpt":0.2229084314095801,"score_spread":0.2103234962681824,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}