{"id":"W4411883243","doi":"10.1038/s41597-025-05192-5","title":"De novo Genome Assembly and Annotation of 12 Fungi Associated with Fruit Tree Decline Syndrome in ON, Canada","year":2025,"lang":"en","type":"article","venue":"Scientific Data","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Hospital for Sick Children; Ministry of Agriculture, Food and Rural Affairs; McGill University; Génome Québec; Ontario Ministry of Agriculture, Food and Rural Affairs; Government of Canada","keywords":"Biology; Genome; Abiotic component; Ecology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005671057,0.001102979,0.001057987,0.003016944,0.003143847,0.002466077,0.0008697908,0.0008466658,0.002528349],"category_scores_gemma":[0.001627094,0.0005529502,0.001061672,0.004982716,0.0005016255,0.0004781637,0.00106888,0.001133328,0.001463068],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005206349,"about_ca_system_score_gemma":0.01825581,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.5978947,"about_ca_topic_score_gemma":0.8013088,"domain_scores_codex":[0.9993104,0.00002819539,0.00003755506,0.0002329878,0.0002355439,0.0001554328],"domain_scores_gemma":[0.9989892,0.0001124029,0.0001291016,0.00006998472,0.0005112251,0.0001881178],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002925386,0.0002791983,0.1050452,0.007612714,0.00093926,0.004930024,0.007459361,0.01057465,0.6008042,0.004511528,0.1008589,0.1540598],"study_design_scores_gemma":[0.0002548536,0.000186583,0.4888046,0.001560068,0.001111385,0.001490494,0.003302666,0.0118386,0.02864163,0.001660756,0.4608844,0.0002639022],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.3747222,0.01059008,0.01841368,0.0008672668,0.0002801648,0.0005602919,0.5762873,0.003144092,0.01513486],"genre_scores_gemma":[0.2349473,0.004810229,0.04926211,0.000417859,0.00004273388,0.0003071836,0.700806,0.001186367,0.008220202],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.4021053,"threshold_uncertainty_score":0.8089468,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01485561878516139,"score_gpt":0.237408308983329,"score_spread":0.2225526901981676,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}