{"id":"W4412006982","doi":"10.1111/1462-2920.70136","title":"Successful Transmission and Isolation of a Fungal Pathogen From Wild Frogs to a Captive Amphibian Model Species: Fine Scale Pathogen Genetic Diversity and Infection‐Induced Changes in Skin Bacteria","year":2025,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Amphibian and Reptile Biology","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institute for Advanced Research; Gordon and Betty Moore Foundation","keywords":"Biology; Amphibian; Genetic diversity; Microbiome; Chytridiomycosis; Host (biology); Genotyping; Zoology; Pathogen; Fungus; Transmission (telecommunications); Ecology; Genetic variation; Population; Genotype; Microbiology; Genetics; Gene; Botany","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002734439,0.000338934,0.0001676281,0.0003007996,0.0004723978,0.0004694831,0.0003091502,0.0003550644,0.0008755933],"category_scores_gemma":[0.0003494961,0.0001490643,0.0001852975,0.0001164027,0.0003410087,0.0002956396,0.0003460297,0.0005237075,0.0001612818],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002197157,"about_ca_system_score_gemma":0.0001548971,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001906871,"about_ca_topic_score_gemma":0.004661453,"domain_scores_codex":[0.9996907,0.00007351934,0.00001566751,0.0001062792,0.00005243278,0.00006151119],"domain_scores_gemma":[0.9997416,0.00005228875,0.00007606966,0.00003536788,0.00003381793,0.00006079059],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001826014,0.0003945646,0.05290623,0.00003732726,0.0000325301,0.0001901367,0.0004795093,0.000086644,0.9413474,0.00008229578,0.0000489203,0.004211891],"study_design_scores_gemma":[0.0000268045,0.003734225,0.7744405,0.00003122794,0.00009471644,0.001679888,0.001663803,0.001590364,0.2153658,0.000119568,0.00122638,0.00002677957],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990319,0.00004128499,0.0005266099,0.00001078258,0.000002307269,0.00002011189,0.00007077551,0.000006303389,0.000289995],"genre_scores_gemma":[0.9971078,0.00005197562,0.002038767,0.00004436046,0.000004547725,0.00003186644,0.0001982176,0.000007470466,0.0005150322],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001906871,"threshold_uncertainty_score":0.003791571,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006548455925662196,"score_gpt":0.18558918901106,"score_spread":0.1790407330853978,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}