{"id":"W4412006982","doi":"10.1111/1462-2920.70136","title":"Successful Transmission and Isolation of a Fungal Pathogen From Wild Frogs to a Captive Amphibian Model Species: Fine Scale Pathogen Genetic Diversity and Infection‐Induced Changes in Skin Bacteria","year":2025,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Amphibian and Reptile Biology","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institute for Advanced Research; Gordon and Betty Moore Foundation","keywords":"Biology; Amphibian; Genetic diversity; Microbiome; Chytridiomycosis; Host (biology); Genotyping; Zoology; Pathogen; Fungus; Transmission (telecommunications); Ecology; Genetic variation; Population; Genotype; Microbiology; Genetics; Gene; Botany","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008344489,0.0001837576,0.0002664239,0.00008733259,0.0001623415,0.000004969192,0.0001042907,0.0002092731,0.0004710696],"category_scores_gemma":[0.000003802199,0.0001714999,0.00003469182,0.00009055047,0.0003211305,0.00005772826,0.0007408378,0.0001000118,0.0000143742],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001534079,"about_ca_system_score_gemma":0.000005259482,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009206411,"about_ca_topic_score_gemma":0.003048659,"domain_scores_codex":[0.9988953,0.0001229484,0.0002089949,0.000509686,0.00004001647,0.0002229797],"domain_scores_gemma":[0.9996729,0.00003295713,0.00007350819,0.0001396467,0.000001351312,0.00007960289],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006600648,0.00005012489,0.4318485,0.000003302496,0.000007509407,0.00000167579,0.001192315,0.00006269806,0.5643727,5.384755e-7,0.00001524951,0.002379405],"study_design_scores_gemma":[0.0006840818,0.0002008105,0.9636526,0.00002442976,0.00002431456,0.000009425526,0.0001757893,0.0005829883,0.03405267,0.00006776155,0.0003486155,0.0001765034],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980459,0.000106329,0.0008024062,0.0001705265,0.00005771926,0.000374206,0.0003538875,0.000009033808,0.00007999391],"genre_scores_gemma":[0.9977068,0.0001925769,0.001631138,0.0001795365,0.0000154215,0.00001089688,0.00009319097,0.00000796706,0.0001624152],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5318041,"threshold_uncertainty_score":0.6993563,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006548455925662196,"score_gpt":0.18558918901106,"score_spread":0.1790407330853978,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}