{"id":"W4412011580","doi":"10.1111/tid.70067","title":"Longitudinal Innate and Heterologous Adaptive Immune Responses to SARS‐CoV‐2 JN.1 in Transplant Recipients With Prior Omicron Infection: Limited Neutralization but Robust CD4 <sup>+</sup> T‐Cell Activity","year":2025,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Toronto General Hospital; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; Government of Ontario","keywords":"Immunology; Immune system; Heterologous; Antibody; Medicine; Immunosuppression; Acquired immune system; Neutralizing antibody; Innate immune system; T cell; Flow cytometry; Neutralization; Immunity; Population; CD8; Virology; Biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003505215,0.000495871,0.0006231301,0.001096173,0.0002637469,0.00008798356,0.000134575,0.0002271842,0.000005587253],"category_scores_gemma":[0.00005599209,0.000445538,0.0001494664,0.001151663,0.0001869987,0.000277842,0.00003683629,0.0006119894,0.00001855106],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003566472,"about_ca_system_score_gemma":0.0004953718,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002428084,"about_ca_topic_score_gemma":0.001512235,"domain_scores_codex":[0.997202,0.0003791584,0.0004649884,0.0008774287,0.0003924087,0.0006839972],"domain_scores_gemma":[0.9988354,0.0002574069,0.000089965,0.0004522346,0.0001793318,0.0001856498],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.05502854,0.001641159,0.8854723,0.0006251728,0.0002228715,0.001101291,0.001018161,0.0009403237,0.05238152,0.00002131884,0.0000209903,0.001526353],"study_design_scores_gemma":[0.008059839,0.00186118,0.8998362,0.001102613,0.0005677022,0.0001907224,0.00002210237,0.003103479,0.08444294,0.00002537358,0.0003188052,0.0004690007],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9924335,0.0002937591,0.004212311,0.0003521142,0.0001110672,0.001852641,0.000241705,0.0002320839,0.0002707544],"genre_scores_gemma":[0.9962533,0.0002213609,0.00003837866,0.00300866,0.00004598166,0.0002722562,0.00005868114,0.00005181874,0.00004958667],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0469687,"threshold_uncertainty_score":0.9997996,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02970022398706987,"score_gpt":0.2936293999632536,"score_spread":0.2639291759761837,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}