{"id":"W4412090238","doi":"10.1128/mbio.01196-25","title":"Auto-aggregation in <i>Streptococcus intermedius</i> is driven by the Pel polysaccharide","year":2025,"lang":"en","type":"article","venue":"mBio","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; McGill University; McMaster University; University of Toronto; Institute of Infection and Immunity; Hospital for Sick Children","funders":"Canadian Glycomics Network; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Hospital for Sick Children; Canada Research Chairs; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Cystic Fibrosis Canada; National Institutes of Health; Cystic Fibrosis Foundation","keywords":"Biofilm; Microbiology; Streptococcus intermedius; Biology; Gene; Mutant; Operon; Pseudomonas aeruginosa; Phenotype; Complementation; Gene cluster; Bacteria; Genetics; Streptococcus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005642464,0.0001136934,0.0001545706,0.000101839,0.00007481968,0.00002536244,0.00007261559,0.00007472669,0.0003000949],"category_scores_gemma":[0.00004209485,0.0000763163,0.00008008305,0.0003406437,0.00006618303,0.00004987248,0.00004135117,0.0001667638,0.00009965154],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001386423,"about_ca_system_score_gemma":0.00006277581,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004173816,"about_ca_topic_score_gemma":0.0001006186,"domain_scores_codex":[0.999301,0.0000227983,0.0001996145,0.0002100913,0.00009680408,0.0001696948],"domain_scores_gemma":[0.9995427,0.0000524037,0.00004235,0.0002842883,0.00003501594,0.00004323555],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00003685101,0.000338129,0.8726129,0.00002135828,0.0001166312,0.00001501626,0.0002953429,7.891631e-7,0.007447476,0.0002150422,0.05146746,0.06743298],"study_design_scores_gemma":[0.005674897,0.0003379545,0.776848,0.0006253371,0.0002602586,0.00002558756,0.0003452706,0.001391892,0.1206929,0.00137078,0.0921733,0.0002538406],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.975883,0.0004224755,0.0001958224,0.007977905,0.0003398598,0.0009375339,0.00002602431,0.00008434991,0.01413302],"genre_scores_gemma":[0.9885511,0.00003624502,0.00003139746,0.001792105,0.00003857088,0.0001779577,0.00002356392,0.000008203773,0.009340863],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1132454,"threshold_uncertainty_score":0.3285829,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009605757019654455,"score_gpt":0.2902171223590677,"score_spread":0.2806113653394133,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}