{"id":"W4412112831","doi":"10.1128/spectrum.00062-25","title":"Genomic variability of lipooligosaccharide biosynthesis locus and sequence type among <i>Campylobacter jejuni</i> isolated from patients with Guillain-Barré syndrome","year":2025,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Fogarty International Center; National Institutes of Health; National Institute of Neurological Disorders and Stroke; International Centre for Diarrhoeal Disease Research, Bangladesh; Global Affairs Canada","keywords":"Campylobacter jejuni; Enteritis; Biology; Microbiology; Phase variation; Campylobacter; Genetics; Gene; Virulence; Bacteria","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001042426,0.0002569013,0.0002031665,0.000738645,0.0002411716,0.0003462026,0.0001357659,0.0003117001,0.001736237],"category_scores_gemma":[0.0006078534,0.0001354137,0.0002385993,0.0008916534,0.000334915,0.0001233081,0.0002132262,0.0002229529,0.0002629268],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002384842,"about_ca_system_score_gemma":0.0001053936,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004979074,"about_ca_topic_score_gemma":0.003423013,"domain_scores_codex":[0.9998021,0.00002713272,0.0000294508,0.00007195796,0.00003379821,0.00003555851],"domain_scores_gemma":[0.9996787,0.00006896049,0.0001103923,0.00001766996,0.00005119047,0.00007302451],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009002091,0.00004596926,0.8857496,0.0000713373,0.00007276352,0.001210824,0.000766912,0.0001441348,0.1066995,0.00006006131,0.0002061766,0.004072443],"study_design_scores_gemma":[0.000008861178,0.0001513093,0.9942529,0.00001158909,0.00003056327,0.001311028,0.0007462651,0.0001755668,0.002848686,0.00002180283,0.0004338541,0.000007694768],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994109,0.00005018188,0.00005193222,0.00001046338,0.000002303992,0.000003196379,0.0002864109,0.00000169401,0.000182961],"genre_scores_gemma":[0.9993314,0.00004142509,0.0001174747,0.00001187755,0.000002220488,0.000004218393,0.0003670928,0.000002463723,0.0001216958],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004979074,"threshold_uncertainty_score":0.009900212,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006038065232732182,"score_gpt":0.1835363618487352,"score_spread":0.177498296616003,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}