{"id":"W4412119879","doi":"10.1111/mec.70015","title":"Signatures of Endosymbiosis in Mitochondrial Genomes of Rhabdocoel Flatworms","year":2025,"lang":"en","type":"article","venue":"Molecular Ecology","topic":"Parasite Biology and Host Interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Bijzonder Onderzoeksfonds UGent; Fundação para a Ciência e a Tecnologia; Natural Sciences and Engineering Research Council of Canada; European Marine Biological Resource Centre Belgium; Vlaamse regering; Universiteit Hasselt; Vlaams Supercomputer Centrum; Hakai Institute; Fonds Wetenschappelijk Onderzoek; Vlaams Instituut voor de Zee; Tula Foundation","keywords":"Endosymbiosis; Biology; Evolutionary biology; Mitochondrial DNA; Phylogenetics; Genome; Gene; Genetics; Plastid","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001713525,0.0002283098,0.0002973186,0.001554865,0.0003240479,0.0004652282,0.0001688813,0.0002809466,0.0006497512],"category_scores_gemma":[0.0007221403,0.0001779334,0.0002963371,0.001318724,0.0002602569,0.0003115305,0.0005491867,0.000242347,0.0002998801],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002203883,"about_ca_system_score_gemma":0.0002108047,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001312571,"about_ca_topic_score_gemma":0.003591317,"domain_scores_codex":[0.9997769,0.00002404811,0.00001684175,0.0001054461,0.00003858182,0.00003816107],"domain_scores_gemma":[0.9993629,0.0001152552,0.0003026908,0.00004547904,0.0000678989,0.0001057484],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006704183,0.00004060269,0.1967067,0.0006411835,0.0002370898,0.0003254109,0.001035711,0.001039044,0.7820152,0.0003554393,0.000303753,0.01662954],"study_design_scores_gemma":[0.000005447026,0.00009297263,0.9908966,0.00003646611,0.00007785731,0.0002846287,0.0002917725,0.0006305264,0.005425819,0.0001463623,0.002094623,0.00001702463],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9950501,0.0005176605,0.0003817562,0.00001744189,0.00000207067,0.000004472819,0.003692855,0.00002180681,0.0003118404],"genre_scores_gemma":[0.9855597,0.0004007131,0.001537797,0.00003944094,0.000005458274,0.00001776744,0.01213203,0.00001791967,0.0002892397],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001554865,"threshold_uncertainty_score":0.002609849,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003984938064813801,"score_gpt":0.2795103296988827,"score_spread":0.2755253916340689,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}