{"id":"W4412143941","doi":"10.1111/eva.70132","title":"Population Phylogenomics and Genetic Structure of the Polyphagous Leafminer, <i>Liriomyza trifolii</i> (Burgess) (Diptera: Agromyzidae)","year":2025,"lang":"en","type":"article","venue":"Evolutionary Applications","topic":"Insect-Plant Interactions and Control","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Huaibei Normal University; Directorate for Biological Sciences; U.S. Department of Agriculture; National Science Foundation","keywords":"Agromyzidae; Biology; Phylogenomics; Population; Botany; PEST analysis; Ecology; Phylogenetics; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000198802,0.00009832959,0.0001170507,0.00002129386,0.0003854716,0.00001886488,0.0001842566,0.00007520067,0.0000745332],"category_scores_gemma":[0.000009454076,0.00004194459,0.00006790103,0.0003578852,0.00005894662,0.00005393846,0.00005344845,0.00009843805,0.000003315171],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000337772,"about_ca_system_score_gemma":0.00001757283,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004980427,"about_ca_topic_score_gemma":0.0002373912,"domain_scores_codex":[0.9993265,0.0000411524,0.0002214141,0.0001980543,0.00008813614,0.0001247173],"domain_scores_gemma":[0.9995856,0.0001066766,0.000102098,0.0001077104,0.00006993099,0.00002795361],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003160198,0.00009603094,0.06881794,0.00001201967,0.00003340933,2.526328e-7,0.00001784315,0.0001297665,0.8659708,0.0133794,0.001552101,0.0499588],"study_design_scores_gemma":[0.0001076839,0.00001940443,0.9588788,0.00001090297,0.00003373562,0.00002146285,0.0000285007,0.0003469108,0.001046084,0.004660103,0.0347623,0.00008409838],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995854,0.001018265,0.0002050196,0.00154537,0.0001190309,0.0004591476,0.0002986723,0.00002525105,0.0004752363],"genre_scores_gemma":[0.9986587,0.00005903246,0.0001565671,0.000262419,0.0001355906,0.00006471432,0.000114468,8.237486e-7,0.0005476924],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8900609,"threshold_uncertainty_score":0.2964775,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003786792158472735,"score_gpt":0.1910146795182643,"score_spread":0.1872278873597915,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}