{"id":"W4412378950","doi":"10.1101/2025.07.11.664470","title":"Coexistence of Photosynthetic Marine Microorganisms, Viruses, and Grazers: Toward Integration in Ocean Ecosystem Models","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Nautical Research Society","funders":"Graduate School, University of Maryland; Simons Foundation; Science Foundation Ireland; Montgomery County Government","keywords":"Ecosystem; Microorganism; Marine ecosystem; Ecology; Photosynthesis; Marine biology; Environmental science; Biology; Oceanography; Bacteria; Botany; Geology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001333469,0.0009065425,0.001313719,0.001221028,0.0008691852,0.001814991,0.0017258,0.001896212,0.00163492],"category_scores_gemma":[0.003803645,0.000776067,0.001380261,0.0007360286,0.001215931,0.001857919,0.003820988,0.001306085,0.0002651272],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001134574,"about_ca_system_score_gemma":0.001046576,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008914796,"about_ca_topic_score_gemma":0.006233311,"domain_scores_codex":[0.9995565,0.0002676437,0.00002162166,0.00004913623,0.0000546913,0.00005046497],"domain_scores_gemma":[0.9982645,0.0008479939,0.0003159581,0.0001138891,0.0002176132,0.0002400057],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.00002952115,0.00009272271,0.003781927,0.00003606072,0.00007153599,0.0001408532,0.0001268875,0.9533464,0.001232051,0.0387851,0.0002570892,0.002099951],"study_design_scores_gemma":[0.000003979257,0.000008100376,0.00009887806,0.000004338962,0.000005370416,0.000004638578,0.00001351308,0.9929699,0.00002481681,0.006730204,0.0001324577,0.000003878157],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.4680184,0.001043503,0.5156277,0.001513865,0.0001126152,0.0001163426,0.0002593602,0.0003778593,0.01293046],"genre_scores_gemma":[0.9439872,0.0004805382,0.05105741,0.0001726977,0.0001148672,0.0002106256,0.0001338407,0.0001149021,0.003727794],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.008914796,"threshold_uncertainty_score":0.01772583,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01810552466249191,"score_gpt":0.2159768052506485,"score_spread":0.1978712805881566,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}