{"id":"W4412470401","doi":"10.3390/agriculture15141532","title":"Metagenomic Profiling of the Grapevine Virome in Canadian Vineyards","year":2025,"lang":"en","type":"article","venue":"Agriculture","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Agriculture, Food and Rural Affairs; Agriculture and Agri-Food Canada; Canadian Food Inspection Agency; Université de Sherbrooke; Brock University","funders":"Genome Canada","keywords":"Human virome; Metagenomics; Profiling (computer programming); Biology; Computational biology; Genetics; Computer science; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002708838,0.0005492066,0.0006069402,0.001463357,0.00184279,0.001391742,0.0004120195,0.0004513205,0.0004987469],"category_scores_gemma":[0.0002838785,0.0002885729,0.0004906006,0.001400382,0.0003122911,0.0002368833,0.0004157047,0.0004475366,0.0001202597],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005501077,"about_ca_system_score_gemma":0.004790104,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7502149,"about_ca_topic_score_gemma":0.8894885,"domain_scores_codex":[0.9995897,0.00001273723,0.000008215842,0.0001479221,0.000152972,0.00008840793],"domain_scores_gemma":[0.9997845,0.0000114746,0.00001681841,0.000007259978,0.0001313717,0.00004864973],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004544793,0.00009612591,0.3242025,0.0002665919,0.0003626909,0.0004969866,0.002672658,0.00169589,0.6438835,0.000322402,0.0008503651,0.02469574],"study_design_scores_gemma":[0.000006456926,0.0001067837,0.9818208,0.00002814262,0.0000914749,0.000211957,0.001453531,0.00112856,0.01066478,0.00003452449,0.004424697,0.00002830112],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940224,0.0009096143,0.0005087198,0.00004227847,0.00000741741,0.00004312649,0.002962086,0.00002522507,0.00147913],"genre_scores_gemma":[0.9884892,0.0009476625,0.002136532,0.00009094029,0.00000400477,0.00002402308,0.005716722,0.00002149164,0.002569387],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2497851,"threshold_uncertainty_score":0.5025122,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01197380969266773,"score_gpt":0.2268007285574691,"score_spread":0.2148269188648014,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}