{"id":"W4412491112","doi":"10.1371/journal.ppat.1013347","title":"Profiling miRNA changes in Epstein-Barr virus lytic infection identifies a function for BZLF1 in upregulating miRNAs from the DLK1-DIO3 locus","year":2025,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"BZLF1; microRNA; Lytic cycle; Biology; Locus (genetics); Epstein–Barr virus; Virology; Virus; Genetics; Gene; Herpesviridae; Viral disease","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003251729,0.0001774833,0.0003257069,0.0002100393,0.0001382828,0.00004321639,0.00006554226,0.0001655589,0.00002858383],"category_scores_gemma":[0.0005076349,0.0001472179,0.0001083764,0.0005497097,0.00003608926,0.00008105404,0.00003488992,0.0002260357,0.000007589763],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003394143,"about_ca_system_score_gemma":0.000113906,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00155088,"about_ca_topic_score_gemma":0.01773866,"domain_scores_codex":[0.9987059,0.00008364316,0.000333483,0.0003490296,0.0001999505,0.0003280086],"domain_scores_gemma":[0.9993131,0.0002046719,0.0001261281,0.0002329231,0.00008576442,0.0000373679],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007300819,0.0003138861,0.4802045,0.0003648719,0.0002094595,0.0000153491,0.001872464,0.0005224351,0.5021781,0.0001414563,0.0003983996,0.01304898],"study_design_scores_gemma":[0.01516414,0.0008039342,0.7945632,0.004010517,0.001369318,0.000003715397,0.007154402,0.02768766,0.1388403,0.008509014,0.001106378,0.0007873739],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946022,0.001548757,0.0003132667,0.001205568,0.0004044374,0.001242916,0.00004996006,0.00007380974,0.0005590945],"genre_scores_gemma":[0.9980986,0.0001852682,0.0001050456,0.0005750047,0.0001655561,0.0004133314,0.00008614463,0.00002640227,0.0003446475],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3633378,"threshold_uncertainty_score":0.9898591,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02267913371142836,"score_gpt":0.2699307046656146,"score_spread":0.2472515709541862,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}