{"id":"W4412610823","doi":"10.17504/protocols.io.n2bvjeo45gk5/v1","title":"Western Blot Protocol - Updated for Lrrk2, Nitrotyrosine, etc. v1","year":2025,"lang":"en","type":"preprint","venue":"","topic":"Radiopharmaceutical Chemistry and Applications","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"","keywords":"Protocol (science); Western blot; Nitrotyrosine; Computer science; Computational biology; Molecular biology; Chemistry; Biology; Medicine; Biochemistry; Pathology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00447371,0.004161548,0.003333834,0.004567772,0.00299227,0.002282494,0.004342481,0.002202761,0.1206162],"category_scores_gemma":[0.004030213,0.003786013,0.002615414,0.003526968,0.001246528,0.00262737,0.002024127,0.007508605,0.1095939],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001300732,"about_ca_system_score_gemma":0.002374099,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002355381,"about_ca_topic_score_gemma":0.003411047,"domain_scores_codex":[0.9951003,0.0009090545,0.0007102774,0.001019406,0.001691632,0.0005693054],"domain_scores_gemma":[0.9975153,0.0004884485,0.0001032461,0.0008356865,0.0009281159,0.0001292498],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001507347,0.0004018466,0.0005581612,0.004756033,0.0002965156,0.0007085898,0.0004885268,0.0005964068,0.536206,0.008595916,0.3832476,0.06263708],"study_design_scores_gemma":[0.0002436753,0.0002281118,0.001836377,0.000360188,0.0001554711,0.001472464,0.00006781083,0.0008893244,0.1541156,0.00309391,0.8373507,0.0001864161],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"protocol","genre_scores_codex":[0.01165252,0.0131644,0.6947099,0.002201762,0.006384111,0.01292273,0.1555979,0.05464387,0.04872293],"genre_scores_gemma":[0.01364483,0.01200383,0.4942307,0.001921781,0.00106987,0.04612043,0.2958323,0.01751346,0.1176628],"genre_candidate":"protocol","genre_consensus":null,"teacher_disagreement_score":0.1206162,"threshold_uncertainty_score":0.4035013,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06586405854404978,"score_gpt":0.4375537249364517,"score_spread":0.371689666392402,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}