{"id":"W4412695745","doi":"10.1099/jgv.0.002114","title":"Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses from the Plant Viruses Subcommittee, 2025","year":2025,"lang":"en","type":"article","venue":"Journal of General Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Biology; Subgenus; Taxonomy (biology); Ratification; Mandate; Taxon; Virus classification; Virology; Zoology; Ecology; Law; Political science; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005859392,0.0001518225,0.0003968242,0.00004250426,0.0001725276,0.00002817197,0.001126572,0.0000899165,0.0002042405],"category_scores_gemma":[0.0002082497,0.00004591072,0.0001471592,0.0001711803,0.000345399,0.00006574866,0.0002698668,0.0003428589,0.000003284755],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000291833,"about_ca_system_score_gemma":0.00003523081,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001187549,"about_ca_topic_score_gemma":0.00291877,"domain_scores_codex":[0.9984543,0.0003724563,0.0004933482,0.0001461558,0.0003259426,0.0002077434],"domain_scores_gemma":[0.996692,0.002510695,0.0005127183,0.0001004218,0.0001460412,0.00003811552],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005869715,0.0001202329,0.01691511,0.000002691102,0.0003199513,0.000004874729,0.00002469327,0.00001649149,0.5259951,0.0002709743,0.4496074,0.006135591],"study_design_scores_gemma":[0.0003908006,0.0005253908,0.05597122,0.00004632013,0.00004365522,0.000005838106,0.0002407849,0.00003188561,0.1223031,0.0002807493,0.8200737,0.00008659716],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9748934,0.002212604,0.00001111568,0.01950364,0.0004533461,0.0002514081,0.001524063,0.000004879968,0.001145541],"genre_scores_gemma":[0.9854349,0.002612391,0.0001307829,0.01014015,0.0008570014,0.00007025315,0.00006953548,0.000001921465,0.000683072],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4036919,"threshold_uncertainty_score":0.223629,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1007387945684114,"score_gpt":0.2795319340256809,"score_spread":0.1787931394572695,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}