{"id":"W4412704013","doi":"10.1073/pnas.2410943122","title":"A trans-species cytoplasmic polymorphism is associated with seed shape and aridity across multiple species of sunflowers","year":2025,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa; Canada's Michael Smith Genome Sciences Centre; University of British Columbia, Okanagan Campus; University of British Columbia; University of Victoria","funders":"","keywords":"Biology; Introgression; Clade; Evolutionary biology; Genome; Nuclear gene; Adaptation (eye); Genetics; Mitochondrial DNA; Phylogenetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003167031,0.0002039514,0.000274059,0.001272836,0.000366542,0.000279084,0.0001903961,0.0002519666,0.0008675461],"category_scores_gemma":[0.0005026602,0.0001342009,0.0002357875,0.0006813129,0.0003213256,0.0002098007,0.0004527358,0.0002922002,0.00009391482],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002034578,"about_ca_system_score_gemma":0.0001085759,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007510394,"about_ca_topic_score_gemma":0.00240685,"domain_scores_codex":[0.9997687,0.00003308036,0.00001888831,0.0001197178,0.0000360577,0.00002353275],"domain_scores_gemma":[0.9994316,0.0001707849,0.0002324395,0.00004994943,0.00003084365,0.00008439396],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006768911,0.00007109046,0.3355039,0.0001147724,0.0002955984,0.0002193126,0.0009557217,0.0003737572,0.6486939,0.0002428362,0.00006163689,0.01279061],"study_design_scores_gemma":[0.00000814312,0.00005858648,0.9953265,0.000006126828,0.00004441316,0.0003207748,0.0001121905,0.0003699617,0.003423593,0.00006937335,0.0002530266,0.000007163418],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995614,0.00005349372,0.0002029151,0.000003975371,7.51255e-7,0.000001176771,0.00008366825,0.000004539306,0.00008817101],"genre_scores_gemma":[0.9991085,0.00003145369,0.0003434107,0.000008143911,0.000002506422,0.000004206551,0.0003984267,0.000005382868,0.00009786538],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001272836,"threshold_uncertainty_score":0.00290221,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02597182700617764,"score_gpt":0.2635065329292196,"score_spread":0.2375347059230419,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}