{"id":"W4412708378","doi":"10.1186/s12870-025-07007-6","title":"Candidate gene identification and marker development for seed coat peeling rate in peanut (Arachis Hypogaea L.)","year":2025,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Peanut Plant Research Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China; Henan Academy of Agricultural Sciences","keywords":"Biology; Quantitative trait locus; Single-nucleotide polymorphism; Genetics; Linkage disequilibrium; Arachis hypogaea; Candidate gene; Population; Genome-wide association study; Locus (genetics); Arachis; Genetic linkage; Genotype; Gene; Agronomy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000408809,0.0004665229,0.0003449852,0.001008414,0.0002348757,0.0003780296,0.0003805384,0.000283099,0.001029826],"category_scores_gemma":[0.0003091785,0.0001419308,0.0006006927,0.001083782,0.0001617153,0.0001267569,0.0002282504,0.0002996069,0.0001817133],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000339371,"about_ca_system_score_gemma":0.0005100029,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003857529,"about_ca_topic_score_gemma":0.005562688,"domain_scores_codex":[0.9998413,0.00001740609,0.00001125357,0.00007640423,0.00003046262,0.00002312489],"domain_scores_gemma":[0.9998115,0.00005461872,0.00006033554,0.000007695554,0.00002988438,0.00003598782],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001526996,0.0003493455,0.1557227,0.0005626315,0.0003839365,0.001199796,0.0002985215,0.001884127,0.7963681,0.0004055671,0.0004691363,0.04082912],"study_design_scores_gemma":[0.0001666327,0.0004347208,0.9504849,0.0000579289,0.0008174478,0.0007580874,0.0002052497,0.01009335,0.03324146,0.0002338711,0.003467986,0.00003842994],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9910779,0.001226211,0.005146076,0.00009059831,0.0000219236,0.00004868502,0.001822074,0.00009070145,0.0004758462],"genre_scores_gemma":[0.9812313,0.000550829,0.01433042,0.00007050335,0.00001260425,0.00005640677,0.002714123,0.00002497215,0.001008768],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003857529,"threshold_uncertainty_score":0.007670164,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03306986253023195,"score_gpt":0.2675467696333712,"score_spread":0.2344769071031393,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}