{"id":"W4412750677","doi":"10.1016/j.str.2025.07.006","title":"Antibody-like recognition of a γδ T cell receptor toward a foreign antigen","year":2025,"lang":"en","type":"article","venue":"Structure","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institutes of Health; Australian Research Council; Faculty of Medicine, Nursing and Health Sciences, Monash University; Monash University; National Health and Medical Research Council; Australian Institute of Nuclear Science and Engineering","keywords":"T-cell receptor; Antigen; Epitope; Phycoerythrin; Biology; Antibody; T cell; Cell biology; Molecular biology; Immune system; Immunology; Flow cytometry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007387751,0.0002116726,0.0003700299,0.0001769367,0.0001201073,0.000008301555,0.0002742277,0.0005439318,0.002497041],"category_scores_gemma":[0.00002778902,0.0001794457,0.0001312299,0.0002555185,0.0002463526,0.00005847308,0.0001037338,0.0003766729,0.0002135408],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002234498,"about_ca_system_score_gemma":0.00009457723,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008380237,"about_ca_topic_score_gemma":0.00001019965,"domain_scores_codex":[0.998838,0.0001346139,0.0003266949,0.0003316596,0.00002803648,0.0003409755],"domain_scores_gemma":[0.9993442,0.00006123284,0.0001566874,0.0003092093,0.0001155944,0.00001302325],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001939529,0.00005685376,0.001633033,0.00008983062,0.0001575002,0.000001993183,0.0003313592,7.861909e-7,0.9861323,0.0004140402,0.005711972,0.005276434],"study_design_scores_gemma":[0.001296198,0.0001535267,0.0009266415,0.00005404774,0.00005565769,0.00001766798,0.000483305,8.913574e-7,0.9392639,0.004867726,0.05270156,0.0001788225],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9800547,0.003470802,0.000365638,0.0001366715,0.00192125,0.0002906795,0.0002870211,0.00007997,0.01339326],"genre_scores_gemma":[0.9935178,0.0002870843,0.0005031021,0.0002267346,0.00003088577,0.000006136937,0.001253598,0.00001419769,0.004160431],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04698959,"threshold_uncertainty_score":0.9984148,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009275209020654217,"score_gpt":0.2332443338808546,"score_spread":0.2239691248602003,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}