{"id":"W4412807140","doi":"10.1007/978-981-95-0695-8_16","title":"Simulating Viral Evolution and Immune Escape Reinfection Dynamics Using Agent-Based Modelling","year":2025,"lang":"en","type":"book-chapter","venue":"Lecture notes in computer science","topic":"COVID-19 epidemiological studies","field":"Mathematics","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Computer science; Dynamics (music); Immune escape; Immune system; Biology; Physics; Immunology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005371299,0.0006342881,0.001095157,0.0005746193,0.0005426596,0.001492014,0.001567184,0.002387217,0.003439821],"category_scores_gemma":[0.003055008,0.0007772645,0.001054998,0.000641087,0.0007539324,0.00142214,0.0008390961,0.001117867,0.000435918],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001148839,"about_ca_system_score_gemma":0.0008210842,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02186535,"about_ca_topic_score_gemma":0.01121115,"domain_scores_codex":[0.9997775,0.00009131918,0.00001161758,0.00004054595,0.00003614912,0.00004298779],"domain_scores_gemma":[0.998255,0.001396308,0.0001194912,0.00005553275,0.00008398326,0.00008974483],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0000121415,0.00001532457,0.0003933496,0.000009694688,0.00001173041,0.00002164035,0.00001347918,0.9962729,0.0002580771,0.00201777,0.00007802261,0.0008959082],"study_design_scores_gemma":[0.000004109894,0.000004681022,0.00006849242,0.000001275334,0.00000319263,0.000004034881,0.000003660592,0.998713,0.00005070327,0.001058013,0.00008636415,0.000002436597],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5997277,0.001082393,0.3684946,0.001086152,0.0002406149,0.0001267059,0.0006772719,0.0005584792,0.0280061],"genre_scores_gemma":[0.9583628,0.0004241604,0.03294443,0.00009896711,0.00004131618,0.00008966379,0.0002243061,0.00006911509,0.007745157],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02186535,"threshold_uncertainty_score":0.04347616,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1045478110121689,"score_gpt":0.3523804804642408,"score_spread":0.2478326694520719,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}